KEGG   Brucella melitensis NI: BMNI_II0570
Entry
BMNI_II0570       CDS       T01853                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bmw  Brucella melitensis NI
Pathway
bmw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BMNI_II0570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmw03019]
    BMNI_II0570
   03016 Transfer RNA biogenesis [BR:bmw03016]
    BMNI_II0570
Enzymes [BR:bmw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BMNI_II0570
Messenger RNA biogenesis [BR:bmw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BMNI_II0570
Transfer RNA biogenesis [BR:bmw03016]
 Prokaryotic type
  tRNA degradation factors
   BMNI_II0570
SSDB
Motif
Pfam: RNB S1 CSD2 RNase_II_C_S1
Other DBs
NCBI-ProteinID: AEQ10280
Position
II:570642..572993
AA seq 783 aa
MARRFSKSDTVRSARTERRAATAQSKDSAAFLPTREEVLKYIEENPDRAGKRELAKAFNI
KGDARVYLKDLLRELADEGLVEKRARKLSRPGSLPSVAVLDITGRDEDGGLLARPAEWDE
ASHGKPPVVLLRRTRLNKTSESGPVVGVGDRVLAKIFRNEDHAGPDFSARVMKRLEHHAN
AVLGVVRKLGNGEWRLEPVNRKQGEVQLDPAMLENAESGDLVEVELLSARRYGLPRGKVR
QVVGSIDSEKALSMIAIHEHEIPHVFPDEVLREAETAGPATLEGREDWREIPLITIDPAD
AKDHDDAVYAEPDTDPENPGGQVVIVAIADVAAYVRPGSALDREAQKRGNSVYFPDRVVP
MLPERISNDLCSLREMEDRPALAVRMIFSADGRKKSHKFHRIMMRSAAKVAYGQAQAAID
GAPDDKTGPILDTVLKPLWNAYAVLKRGRDAREPLELDLPGKKILLTPEGKVDKVIVPER
LDAHKLIEEFMIQANVSAAETLEGRHQPLIFRIHGEPALAKQETLREFLRTLDLNLAKGA
QLQPAQFNRILAAVDGTDHQELVNQVVLRTQSQAEYSPDNIGHFGLHLRRYAHFTSPIRR
YADLIVHRALIKALGLGTDGLTSAEEAQLEEISALISATERRAMLAERETVDRLIAHFLA
SHLGDEYEGRVTGVTRAGLFVNLATYGADGLVPISTLGDEYYLYDEANHAIAGERSGRGF
RLGDTVTVRLVEALPVAGALRFEMVSEPHPLPMSTRSHHKASRAMRGRKGKPAGIPRHKR
RGH
NT seq 2352 nt   +upstreamnt  +downstreamnt
ttggcacgccgtttttccaaatccgataccgtacgatccgcacggaccgagcggcgtgca
gccacagcccaatcgaaagattccgcagcctttttgccgacacgggaagaggtcctcaaa
tatatcgaggaaaatcccgatcgcgcgggcaagcgggaactcgccaaggctttcaacatc
aagggcgatgcacgggtctatctgaaagacctgttgcgtgagcttgccgatgaaggtctc
gtcgaaaagcgcgcgcgcaagctttcgcgtcccggctcgctgccatcggttgcggttctc
gatattacgggccgggatgaggatggaggcctgcttgcccgcccggctgaatgggatgag
gcgagccacggcaagccgccagtggtcctgctgcggcgaacccggcttaacaagacgtca
gaaagtggccctgtcgtcggcgttggcgaccgcgttctggcgaaaatcttccgcaatgaa
gatcacgcagggccggatttttccgcccgcgtgatgaagcggctggaacatcacgccaat
gccgttctgggcgtggtgcgcaaacttggcaatggcgaatggcggctggagccggtcaat
cgcaaacagggcgaagtgcagcttgatcccgccatgctggaaaatgccgaaagcggcgat
ctggtggaagtagaactgctttccgcgcgccgttacggcctgccgcgcggcaaggtccgt
caggtggttggctccatcgatagtgaaaaggcgctgtcgatgatcgccattcacgaacat
gaaatcccgcatgtttttcctgacgaagtgctgcgcgaggctgaaaccgcaggccctgcc
acgctggaaggccgcgaagactggcgcgaaatcccgctcatcaccatcgatccggccgac
gccaaggaccatgacgatgcggtctatgccgaaccggatacggacccggaaaatcccggc
gggcaagtcgtcatcgtcgccatcgccgatgtcgccgcctatgtgcggcccggctcagcc
cttgatcgcgaagcgcagaaacgcggcaattccgtctattttcccgaccgcgttgtaccg
atgctgcccgaacgcatctccaatgatctttgctccctgcgcgagatggaagaccggccg
gcgctggcggtccgtatgattttcagtgccgacgggcgcaagaaatcacacaagttccac
cgcatcatgatgcgctcggccgccaaggttgcctatggccaggcgcaagccgccatagac
ggcgcccccgatgacaagaccgggccgattcttgataccgttctaaagccgctctggaac
gcctatgcggttctcaagcgcgggcgtgacgcacgcgagccgctggaactcgatctgccg
ggaaagaaaatcctactgacgccggaaggcaaggtggacaaagtcatcgtgccggaacgc
ctcgatgcgcataagctcatcgaagaattcatgattcaggccaatgtgtctgccgccgaa
acgctcgaaggacggcaccagccgcttattttccgcattcacggtgaaccggcgctggcc
aagcaggaaaccctgcgtgagttcctgcgtacgctggatctcaatcttgccaagggcgcg
caactgcagcccgcgcagttcaatcgcattctggcggcggtcgatggcacagaccatcag
gaactcgtcaatcaggtcgtgctgcgcacccagagccaggccgaatacagccccgacaat
atcggccattttggcctgcatctgcgccgttatgcgcatttcacctcaccaatccgccgt
tatgctgatctgatcgtgcaccgcgcgctcatcaaggcgctggggcttggcacggacggg
ttgacgagcgcggaagaagcgcagcttgaagagatttcggccctgatttcggccaccgaa
cgccgcgccatgctggctgagcgtgaaaccgtggatcggctgatcgcgcatttcctcgcc
tcgcatctcggcgacgaatatgaggggcgcgttaccggcgtcacgcgcgccggtctgttc
gtcaatcttgcgacatatggcgcagacggactggtgcccatttcaactttgggcgatgaa
tattatctatatgacgaagcaaaccacgcaatcgcgggcgaacgaagcggcaggggcttt
cgtctgggcgatacggtaacggtgaggcttgtggaagcactccccgttgcgggtgcgctt
cgttttgaaatggtttccgaaccgcaccccttgcccatgtcgacgcgctcgcatcataag
gcgagccgggcaatgcggggccggaaaggcaagccggcgggtattccccgccacaagagg
agaggtcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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