KEGG   Halobacteriovorax marinus: BMS_2016
Entry
BMS_2016          CDS       T01659                                 
Symbol
rnc
Name
(GenBank) Ribonuclease III (RNase III)
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
bmx  Halobacteriovorax marinus
Brite
KEGG Orthology (KO) [BR:bmx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmx03019]
    BMS_2016 (rnc)
   03009 Ribosome biogenesis [BR:bmx03009]
    BMS_2016 (rnc)
   03036 Chromosome and associated proteins [BR:bmx03036]
    BMS_2016 (rnc)
Enzymes [BR:bmx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     BMS_2016 (rnc)
Messenger RNA biogenesis [BR:bmx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BMS_2016 (rnc)
Ribosome biogenesis [BR:bmx03009]
 Eukaryotic type
  90S particles
   RNase
    BMS_2016 (rnc)
 Prokaryotic type
  rRNA processing factors
   BMS_2016 (rnc)
Chromosome and associated proteins [BR:bmx03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     BMS_2016 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: CBW26828
UniProt: E1X2Z8
Position
complement(2028595..2029380)
AA seq 261 aa
MHENFGESISDFSQLDTVLKDQEIILNLQRNISHKFKNMALLYEALTHSSFGHECFGDSK
KSYERLEFLGDSVLDLIITDLLQEKFPAMVEGKLSKLRASLVNEVSLKELASSLEIERAV
LVGKGELKAQGNLKSSILSDVFEAVLGAIYKDSSLEVSKKSFISIIENYEKLSGQIYLDE
KRLQEFDSKSRLQEMTMSLFKTLPKYSAKELSNGNFEVEASVLDKFLEKGEFSSKKKGEQ
KLAKNIIIKIEEYAKRSANVN
NT seq 786 nt   +upstreamnt  +downstreamnt
atgcatgaaaattttggagagagtatctctgatttttcacaattagatacagtattaaag
gatcaggaaatcattcttaaccttcagagaaatatctcccacaaatttaaaaatatggcc
cttctttacgaagcgcttactcattcgtcttttggtcacgaatgttttggtgattcaaag
aaatcttatgagcgactagagttcttaggagatagtgttctcgatttaatcattactgat
ctcttacaagaaaaatttcccgctatggtagaaggaaaattgtcaaaattaagagcttcc
ttagtgaatgaagtgagcttaaaagagttggcaagctctcttgagatagaaagagctgtg
ttggttggaaagggtgaacttaaggcacaaggaaacttaaagagctctatactcagtgat
gtattcgaagcagtactcggagctatttataaagactcatcacttgaagtttctaagaag
agttttatttctattattgaaaattatgaaaaattaagcggtcaaatctatttagatgaa
aagagactgcaagaattcgattcaaagagtcgcttacaagagatgacgatgtctcttttt
aaaacattgccaaagtactcggctaaagagctttcaaatggaaattttgaagtagaggca
agtgttttagataaattcttagaaaagggagagttctcttctaagaagaaaggtgaacag
aaattagcaaaaaatataattataaaaattgaagaatacgcaaaaaggagcgcaaatgtt
aattga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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