KEGG   Halobacteriovorax marinus: BMS_3221
Entry
BMS_3221          CDS       T01659                                 
Symbol
rph
Name
(GenBank) putative ribonuclease
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
bmx  Halobacteriovorax marinus
Brite
KEGG Orthology (KO) [BR:bmx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bmx03016]
    BMS_3221 (rph)
Enzymes [BR:bmx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     BMS_3221 (rph)
Transfer RNA biogenesis [BR:bmx03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BMS_3221 (rph)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: CBW27972
UniProt: E1X036
Position
complement(3220056..3220760)
AA seq 234 aa
MSIIERSQPRDIKFTAGINPYAAGSVIAEFGNTKVHITATVEESVPRFLKDKGQGWITAE
YSMLPSSTHTRNRRERSKVSGRTQEIQRLIGRSLRAIIDLEKLGERSIQIDCDVLVADGG
TRTTSISGAYVALEMAVEKLLESGLIEETPIKEPLAALSVGINSAGKVIADLNYDEDSTC
ETDMNIVMTKSGKFIEVQGTAEGEAFSRDELNAILECATEAIQSVFKEQEKVLS
NT seq 705 nt   +upstreamnt  +downstreamnt
atgtcaattatcgaaagatctcagcctagagatattaaatttacagcgggaattaaccct
tatgcagcaggaagtgttattgcagaatttggaaacactaaggttcatattactgcaaca
gttgaagaaagtgttccaaggttcttaaaggataaaggacaaggttggattacagctgag
tactctatgcttccgtcttcaactcatactagaaatagaagagaaagaagtaaggtcagt
gggagaacacaagagattcaacgactcattggaagaagcttaagggccattattgatctt
gaaaagctaggtgagagaagtatccaaattgattgtgatgtcttagttgctgatggtgga
actcgtacaacatctatttcaggggcgtatgttgcacttgagatggcagtcgagaaatta
ctagagtctggtcttattgaagaaacaccaataaaggagcctttagcggcacttagtgtt
ggaataaattctgcaggtaaagttattgctgaccttaattatgatgaggattcaacttgt
gaaacagatatgaatatcgttatgactaaatctggaaaatttattgaagttcagggaaca
gcagaaggtgaagcattttcaagagatgaactcaatgcgatcctagagtgtgctacggaa
gcaattcaatctgtttttaaagagcaagaaaaggttttatcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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