KEGG   Bacillus pseudomycoides 219298: DJ92_1508
Entry
DJ92_1508         CDS       T03239                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bmyc  Bacillus pseudomycoides 219298
Pathway
bmyc03410  Base excision repair
bmyc03430  Mismatch repair
bmyc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bmyc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DJ92_1508 (recJ)
   03430 Mismatch repair
    DJ92_1508 (recJ)
   03440 Homologous recombination
    DJ92_1508 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmyc03400]
    DJ92_1508 (recJ)
DNA repair and recombination proteins [BR:bmyc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DJ92_1508 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DJ92_1508 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DJ92_1508 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 PhoU DUF5368 DUF6324
Other DBs
NCBI-ProteinID: AIK36098
Position
complement(1412349..1414688)
AA seq 779 aa
MLQPKTRWKEKSFNEELVSELASKLQLSPLVTSLFLSRGLDTEDKIVDFLNTGQQEFHDP
FLLEGMDLTVERIGQAIQNGEQILIFGDYDADGVSSTTVLFLALQELGADVEFYIPNRFT
EGYGPNEEAFRWAHRAGFSLIITVDTGIAAVHEAQVAKELGIDLIITDHHEPPPELPEAL
AIIHPKLKGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL
VQRGLKQMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAIGRLEDAAPAVHLLL
SEDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNYPPEDNKVLVLAKEGWNPGVI
GIVASKLVERFYRPTIVLCIDPEKQTAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAA
GMTLHMNDVDELRRRLNEQADAILTSEDFTPITTVDAICKVEDVTLSAIEEMQKLAPFGV
GNPKPRIAIRDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAHVSV
VGEASINEWNNFKKPQLMIQDIAVDAWQLFDWRSMRNVESNLAELSREKITMVYFSEEVL
NKFSLEEYKEQLIHASEVTDLDGRYIVLLDLPKSTDELRGLFEAGFPARIYTLFYQENNH
LFSTVPTREHFKWYYSFLHQKAPFSLRQHGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK
DGVIFMAEEMKKRDLIESNTYREKMNHLQLEKELIYSTYQQLYTWFETIRNHKEVEQLG
NT seq 2340 nt   +upstreamnt  +downstreamnt
gtgttacaaccgaagacgcgttggaaagaaaagtcatttaatgaggaactggtgagtgaa
ttagcaagtaaattgcaattatcaccgcttgttacttcgttattcctcagtagaggttta
gatacagaagataagattgtggattttttaaatacaggacagcaagaatttcacgatcca
tttttgcttgaaggaatggaccttacggtagaacgtatagggcaagccattcaaaatgga
gaacaaattttaatattcggagactatgatgcggacggtgtaagtagtacaaccgtttta
tttcttgctcttcaagaattaggtgcggatgttgagttctatattccaaaccgatttact
gaagggtatggaccgaatgaagaggcgttccgctgggcacaccgtgcgggattttctctt
atcattactgttgatacaggtatcgcagcagtccatgaggcgcaagtagcaaaagagctt
ggtatagatcttattattacagatcatcatgagccgccgccagaactgccagaagcactt
gcgattattcacccgaagctaaagggtggtgtttacccgtttcattatttagcgggcgtt
ggtgttgcgtttaaagtagcgcatgcactacttgggcgtgtgccggagcatttattagaa
attgcagtgattggtacggtagccgatttagtatcacttcatggtgaaaatagattgctt
gtgcagcgtggattgaaacaaatgcgaatgacaaaaaatattggtttaaaagcattattt
aaagtagcaaatgtttcacaaagtgagattacggaagagagcattggtttctcaattgca
ccgcgtattaatgcaattggtcgtttagaagatgcggctccggcagttcacctcctttta
tcagaagatccagaagaagcgaaagagcttgctgaagaaattgatgaactgaacaagctt
cgaaaagatattgtaaagcaaattacagaagaggcgattgcagaggtagaaaacaattat
ccgccagaggacaataaagtgttagtgctcgcgaaagaaggatggaatccaggagtaata
gggattgttgcttctaaattagtagaacgcttttatcgtccaacaattgtattgtgtatt
gatcccgagaagcaaacagcaaaagggtctgctcgtagtattgcaggatttgatttattt
gcaaacttatcagattgtagggaattgttaccgcactttgggggacatccaatggcggcg
ggaatgacgcttcatatgaatgatgtggatgaactgcgccgccgcttaaatgaacaagca
gatgcgattttaacgtctgaagattttactccgattacaacagttgatgcgatttgcaaa
gtggaggatgtgacgctctcagcgattgaggaaatgcagaagctcgcaccgtttggtgtt
ggaaatccgaagccgcgtatcgcaattagagatgcggagttagaaagtattcgtgccatt
ggatctgatggttctcatttgaaaatggcacttcgtgacggacaggcgacgttagatacg
attggatttggttttggagcctatgcgaaagaaatttctccagttgctcacgtttctgtc
gttggtgaggcatcaattaatgaatggaataatttcaaaaaaccccaacttatgattcaa
gatattgcggtagatgcatggcaattatttgattggcgtagtatgcgtaatgtggaatcg
aacttagcagaactttcacgagaaaaaataacaatggtgtatttttctgaagaggtatta
aataaattttctttagaggaatataaagaacaacttatacatgcttcagaagtgactgac
ctagatggtcgttatattgtgttgctagatttaccaaagtcaacggatgaattacgaggt
ttatttgaggcaggattcccagcgcgaatttatacgctgttttaccaagagaataatcat
ttatttagtacagttccaacaagggaacactttaaatggtactattcctttttacaccaa
aaagcaccattttctttaagacaacatggagaacagctatgtcgtcataaaggttggtca
aaagatacagtaaatttcatgacacaggtgttttttgagttagaatttgttacaataaaa
gacggtgtcatttttatggcagaagaaatgaaaaagcgtgatttaattgaatcgaacaca
tatcgtgagaaaatgaaccatttacaactagaaaaagagttgatttatagcacatatcaa
caattatatacatggtttgaaacgattcgtaatcataaagaagtagaacagttagggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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