KEGG   Bacillus pseudomycoides 219298: DJ92_5664
Entry
DJ92_5664         CDS       T03239                                 
Name
(GenBank) DNA topoisomerase family protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
bmyc  Bacillus pseudomycoides 219298
Brite
KEGG Orthology (KO) [BR:bmyc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bmyc03032]
    DJ92_5664
   03400 DNA repair and recombination proteins [BR:bmyc03400]
    DJ92_5664
Enzymes [BR:bmyc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     DJ92_5664
DNA replication proteins [BR:bmyc03032]
 Prokaryotic type
  DNA Topoisomerases
   DJ92_5664
DNA repair and recombination proteins [BR:bmyc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DJ92_5664
SSDB
Motif
Pfam: Topoisom_bac Toprim_Crpt Toprim zf-C4_Topoisom Mnd1
Other DBs
NCBI-ProteinID: AIK35388
Position
unnamed5:complement(269613..272267)
AA seq 884 aa
MGKTLFIAEKPKVAYELLKSPQFRNAEKYMGSKPYFGYFENQKYIISWCSGHLLELKHPE
EIDEKYKEFKFEHLPLLLEPEYKVKQDYIEQINILVDLLQRQDVDHVVNACDGDREGELI
YREMYEYAGVNKRQSRLWLASYEPAELEAGLNRLEPGEHYDGLANSAKARQYLDYLLGIN
VTRGCTTKLAKNQFLLATGRVQMCLLHEIWQREVAIENYREQTYYNLKLITDNGLEAVMK
TEDQLLDPAPLQKLGTKLVGTALTVTEFKENTRKKKPKLLYNLTDLYKEAHSKLKVSAET
AKKHIQSLYEEGWISYPRSSSRHLPTEKVGRVQEVFKALQSTNYADLVQLVDPHTITEKH
ATFNDELVDSHFAIIPTTKPYDGTNRKPLEIQLYDLIVKRFIGNFMPPAIYLVREAQFID
REESIYSTKEKVLQEKGFLSVFHEDMEEGSVESFQIPFLYEGDSFQIVKHDLMQSKTKKP
AFHTESSILTFMETAGRKLDDDHLKELMKGKRIGTVATEETFIPKLATRNYITVTNGQIR
TTKIGRAFVEKFPIDEIKNPAYTAEMEGMIHMIEKKEMQYGEFVENTNTFVKETVEKLGE
TEEKVADEMILNWSQQIEVCRCPCKKGKILHKGNFYGCSNYPECEIRMPKKIKEKAIPEA
QIKKLFESKKTDLLKGFKSGEKEFSAYLVFREDKVQFQFPTTDELSLGKCPDCKKGDILH
RKTFFGCTEYKNGCKFMLPAKIKEKAIPPSQLKKILKGQCSDFIQGFKGEKGEFTAALYL
DKEGLKFRFPTMEDRTLGKCPLCKSRVIVGKSNYLCEQYKKTCEFIIPGVVSGKKISSNN
VIKILEKNMTDQIKGFESKNNGKKFDARLSYSTQEKRLKFLFGK
NT seq 2655 nt   +upstreamnt  +downstreamnt
atgggaaaaacattattcattgcggaaaagccaaaagttgcatacgaattattgaaatca
ccacagtttcgaaatgcagaaaagtatatgggaagtaagccatactttggttactttgaa
aatcaaaaatatattattagttggtgttctggtcatttattagagctgaagcatccagaa
gaaatagatgagaaatacaaagaatttaaatttgaacatttgcctcttttattagagccg
gaatacaaagtgaagcaagattatatcgaacaaatcaatattttagtagatctattgcaa
cgtcaggatgtagatcatgtggtcaacgcttgtgatggagaccgtgagggcgagctgatt
tatcgtgaaatgtatgaatatgcgggtgtaaataaacgacaatctcgcctctggcttgct
tcgtatgagccagcagaattagaggcaggactgaaccgattagagccaggggaacactat
gacggacttgcaaattccgcaaaagcaaggcaatacctagactatcttctcggaattaat
gtgacgagaggatgtacaacgaaacttgctaaaaatcaattcttattggcaacggggcgt
gtgcaaatgtgcctgttacatgagatttggcaacgtgaggtagcgatagagaattatagg
gaacaaacctactataatctaaagctcatcacagacaacggtttagaggcagttatgaag
acagaagaccagttattagatccggctcctttacaaaagcttgggacgaaactagtcggt
acagcattaaccgtaacggagtttaaagagaataccagaaaaaagaaaccaaaattgtta
tataacctgacggatttgtataaagaggcacattcaaaattgaaagtgagcgcagagacc
gcaaaaaaacatattcagagtttatatgaagaaggttggatttcgtatcctcgttcatcg
tccaggcatttgccaacggaaaaggtaggcagagtacaagaagtattcaaagccttgcag
tctaccaattatgcggatttggtgcaacttgtagatccgcataccattacagaaaaacat
gccacatttaacgatgagcttgtagatagtcactttgccatcatcccgacaacaaaacca
tatgacgggaccaacagaaaaccattagaaattcaattatatgatcttattgtgaaacga
tttattgggaactttatgccaccggctatttatttggtacgtgaggcacagtttatagat
cgagaggaaagcatatacagtacaaaagagaaagttcttcaagagaagggatttttaagc
gtatttcatgaggacatggaagaaggttctgtggaaagctttcaaatcccttttttatat
gagggagactcgttccaaatcgtaaaacatgacttaatgcagtcgaaaacaaagaaacca
gcatttcatactgaaagctccattctaacgtttatggagaccgccggtcgtaaattagat
gatgaccatttaaaagagctaatgaaaggaaaacgtattgggacggttgcgacagaggag
acctttattccaaaactcgcaacgagaaattacatcacagttaccaatggccaaattcgt
actacgaaaattggtcgtgcatttgtagaaaaatttccgatagatgaaatcaaaaatcca
gcttatacggctgaaatggaagggatgattcatatgatcgaaaagaaggaaatgcaatac
ggtgaatttgtggagaatacgaatacatttgtaaaagaaacggttgagaagcttggagaa
acagaagaaaaagtagcggatgaaatgattttgaattggagtcaacaaattgaagtatgc
cgttgcccatgcaaaaagggtaagattcttcataaaggaaacttctatggatgcagtaat
tatccagagtgtgagatccgtatgccaaagaaaattaaagaaaaagcgattcccgaagca
caaataaaaaagctatttgaaagtaagaaaacggatctgttaaaaggttttaaatccggt
gagaaagagttttcagcgtacttagtattccgagaagacaaagtacaatttcaatttcca
acgacagatgagctgtctctagggaagtgtccagactgtaaaaaaggggatattcttcat
cggaaaacgttttttggatgcacagaatataaaaatggctgtaagttcatgttgccagct
aaaatcaaagaaaaagcgattcctccttctcaactgaaaaagatactgaagggacaatgt
tcagacttcattcaaggatttaaaggagaaaagggtgaatttacggcggcactctatttg
gataaggaaggtttaaagtttcgatttccaacgatggaagatcgtacactagggaaatgt
ccactatgcaaaagccgagtcattgtagggaaatcaaattacttatgcgagcaatataaa
aagacttgtgaattcattattccaggtgtcgtgtctggaaagaaaattagtagtaacaat
gtgatcaaaatattagaaaagaacatgaccgatcaaattaaaggatttgagtccaaaaat
aatgggaagaaatttgatgctcgtttatcctacagtacgcaagagaaacgattaaaattc
ttatttggaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system