KEGG   Bacillus pseudomycoides 219298: DJ92_839
Entry
DJ92_839          CDS       T03239                                 
Symbol
rnjB
Name
(GenBank) ribonuclease J 2
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bmyc  Bacillus pseudomycoides 219298
Pathway
bmyc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmyc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DJ92_839 (rnjB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmyc03019]
    DJ92_839 (rnjB)
Messenger RNA biogenesis [BR:bmyc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DJ92_839 (rnjB)
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 PDEase_II
Other DBs
NCBI-ProteinID: AIK40208
Position
complement(809398..811068)
AA seq 556 aa
MKRKEIDSVKVFALGGVGEIGKNMYCVEIGSEIFIVDAGLMFPGDEMFGIDIVIPDITYL
VENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGRVDLK
TIDSNSAVEFNTTTVSFFGTTHSIPDSVGVCFHTSQGAIVYTGDFKFDQTPIGNSGADLG
KMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGIEISKVFYNAEGRIIVASFASNVHRIQ
QVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPDGMVISLQEVDNFPEKKVAILTTG
SQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEVVYYG
ERKVHVSGHGSQEELKLMLNLMKPKYFIPVHGEFRMQKAHAYLAEDVGVLKENIFIVEKG
DVIAFEGEEAKQAGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKK
IISGPEIISRGFVYVRESEALIERSTDIVRTIVEQSIKEYSIEWSMLKQNIRELLGQFLY
EETKRKPMILPIIMEV
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgaagagaaaagagattgattctgtaaaggtatttgctcttggtggagtaggtgaaatc
gggaaaaatatgtattgtgtggaaattggttccgaaatttttattgtggatgcaggattg
atgttcccgggagacgaaatgtttggaattgatattgttatccctgacattacatattta
gtagaaaatcaagagcgagtaaaaggtttatttattacacatggtcatgaagatcatatt
ggtggaattgtttatgtgctgcgcaaactttccatcccggtgtatgcaacgaagttaacg
gtaggtcttatacaagaaaagctcggtgaagcggggatgctaggccgtgtagacttaaaa
acaattgattcgaattcggctgtagaatttaatacgacaacggtttcattctttggaaca
acacacagtatcccagattctgttggtgtgtgcttccatacatcacaaggagccattgta
tatacaggagattttaaatttgaccaaacaccaattggcaacagtggggcagaccttgga
aagatggcgcaaattggaaatgaaggcgttctttgtctgttatcagatagtacaaatgct
gaacgtcctggttacacggggtctgaaaaagaagttggtatagaaatttcaaaagtattt
tataatgcagaaggacgtatcatcgttgcttctttcgcatctaatgtacatcgtattcaa
caagtatttgatgcagctgctgaaacaggccgtaaagtggccgttgtaggtcgtagtatg
gtgaaagtggtagatattgcaaggcgtcttggatatttagacgttccagatggtatggtt
atttcattgcaagaggtagataatttcccggagaagaaggtagcgattttaacaactggt
agtcaaggggaaccgatggcagctctttcaagaatggcaaagcaagctcataaacaaatt
tcaatccgtaaaggagacacagttatcattgcagcttctccaattccgggaaatgaaata
tcagtatctaaaattattgatttattatttagggctggtgcagaagttgtttattatgga
gaaagaaaagttcatgtttcgggtcatggtagtcaagaagaattgaaattgatgctgaat
ttaatgaaaccgaaatattttatacccgtacacggcgaatttcgtatgcaaaaagcacat
gcgtatttggcggaagatgttggtgtcttgaaagaaaacatttttattgtagaaaagggc
gatgtaattgcttttgagggcgaagaggcaaagcaagctggtaaggtacaagcgggtaat
gttcttattgatggattaggtgtaggcgatgtcggaaatattgtcttgcgtgatcgtaag
atgttatcacaagacggaattttagtcgttgttgtaacgcttggaaaagatgagaaaaag
atcatctctggaccagaaattatttcgcgtggttttgtgtatgttcgtgaatctgaagcg
ttaatcgaaaggtctacagatattgtacgtacaattgttgaacagtccattaaagagtat
tctattgaatggtccatgctaaaacaaaatattcgtgaattattaggacagtttctgtat
gaggaaacgaagagaaaaccgatgattttaccaattatcatggaagtataa

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