KEGG   Brucella melitensis M28: BM28_A0829
Entry
BM28_A0829        CDS       T01852                                 
Name
(GenBank) metal dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bmz  Brucella melitensis M28
Pathway
bmz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BM28_A0829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmz03019]
    BM28_A0829
Messenger RNA biogenesis [BR:bmz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BM28_A0829
SSDB
Motif
Pfam: RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Regulator_TrmB
Other DBs
NCBI-ProteinID: ADZ65905
Position
1:816547..818223
AA seq 558 aa
MARSNTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPD
IRYLEAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFIAGLLEAKRQSEDSAPE
IPITIYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPV
IDEARFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNV
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMI
LTGSQGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKII
GDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRD
GDMLRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
MLDEPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAA
NEAWGKKPVVTVFVNRIR
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggcccggtccaatactacggaattcgtctttctgccgctcggcggtgtaggcgaaatc
ggcatgaatttggccatgtatggttttggtcctgcggataaccgcgaatggctggtcgtg
gatatgggggtcagctttgccgggccggaacagccgggcgccgacctcattctgccggat
attcgctatctcgaagctgaaaagcacaatctgcgcggcattgtcatcacccatgcgcat
gaagatcattttggtgcgctgcttgatctttggccgcgcctgaaagttcccgtctatgcg
acgccgttcatagctggtctgctggaagccaagcgccagtcggaagacagtgcgccggaa
attccgatcacgatctataaggccggcgagacgtttgaagtcggcccgttcaagattgaa
gccgtcgctgtcacccattcgattccggagccggtttcgctggccatcaccacgccgctt
ggcacggtggtgcatacgggcgactggaaaatggatcccgagccatcgcttggccccgtc
attgacgaagcgcgctttcgcgccataggtgaggccggtgttctggcgctgatctgcgac
tctaccaatgcgctgcgtgaaggtgagtccccatcggagcgccaggtgggtgaaagtctg
cgcgaactgatccagaatgcgcgcggacgtgtggcgatcacaactttttcctccaatgtg
gggcgtatccgttcgatcacggaagctgcccgcgatgcgggccggcaggttctggtggtg
gggcgttcgatgaagcgcgccatctcggttgcaaccgaacttggttatatggaaggcctg
ccggaatatctcagcgaagaggattacggctacattccgcgtgaaaatgtggtgatgatc
ctgaccggcagtcagggcgaaccgcgcgcggcactggcgaaacttgcccgcgatgagatg
cgcagcctcgccctgacggcgggtgatacggtcatctattcgtcgcgggccattcccggc
aacgaaaaggccattctcgacatcaagaaccggctgatcgatcgcggtatcaagatcatt
ggcgatgaggacgccctcgttcacgtttcaggccatccgcgccgcagtgagttgcgccgc
atgtattcctgggttcgtccgcagattctcgtgccggtgcatggcgaggccgctcatctg
gtcgcgcaagggtctctgggtgcgatggagggcatcgagcagatcgcacaggtacgtgac
ggcgacatgctgcgccttgcgcccggcaaggccgagatcattgacgaagcgccagtgggc
cgcctctacaaggacggcaagctgatcggcgacgaagaagaaatcggtatggtggagcgg
cgcaagctcgcctatgtcggccatgtcgcggtatcggttctgctcgaccgggagcacaag
atgctggacgaacctgaccttgtggccttcggcctgcctgaggaggacaggcagggtgaa
ctgatggaagacattctgctggatgcagccattgaggcgatcgacagcataccgcgcgtt
cgccgcaaggatattgagacggtgcgcgagtctgttcgccgcgccgtccgggctgcggca
aatgaagcctggggcaaaaagccggtagtgaccgtcttcgtgaataggatacggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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