KEGG T01852: BM28

Brucella melitensis M28: BM28_B0577

Entry

BM28_B0577        CDS       T01852

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

bmz Brucella melitensis M28

Brite

KEGG Orthology (KO) [BR:bmz00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bmz03032]
    BM28_B0577 (topA)
   03400 DNA repair and recombination proteins [BR:bmz03400]
    BM28_B0577 (topA)
Enzymes [BR:bmz01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BM28_B0577 (topA)
DNA replication proteins [BR:bmz03032]
Prokaryotic type
  DNA Topoisomerases
   BM28_B0577 (topA)
DNA repair and recombination proteins [BR:bmz03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BM28_B0577 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Peptidase_M35

Other DBs

NCBI-ProteinID:

ADZ67826

Position

2:569439..572072

AA seq 877 aa
MNVVVVESPAKAKTINKYLGSDYKVLASFGHVRDLPAKDGSVRPDEDFAMSWEVDSNSAK
RLADIVKALKDSDGLILATDPDREGEAISWHVLEVLRQKKALNGKTVKRVAFNAITKKAV
LDAIAHPRDIDEPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
EAEIERFVREEYWNIAALLKTPRNDSFTARLTALDGKKLGKLDIKNGEQAGAIRTMLESA
NFKAVSVEAKPTKRNPGPPFTTSTLQQAASGQLGFSASRTMQVAQRLYEGVDIGGETAGL
ITYMRTDGVQIAPEAINAARDAIAKSFGAKYVPEKPRYYSSKAKNAQEAHEAIRPTDFSR
HPKDVRRFLDEDQARLYELIWKRAIASQMQAADIERTTVDIEATNGSRAAMLRANGSVTK
FDGFLAAYMDHREEEDDDEESAKLPEIRSGEALAREKIDATQHSTEPPPRYSEATLIKKM
EELGIGRPSTYAATLATLRDREYIIIDKRKLIPEAKGRLVTAFLESFFERYVEYDFTADL
EEKLDLISDGKLSWKEILRDFWRAFSGSVEDIKELRVTNVLDALNEELAPLVFPAREDGS
DPRSCPTCGTGTLSLKLGRYGAFVGCSNYPECKYTRQLGGEANGETAASDEPKPLGKDPF
TGEEITARTGRFGPYIQRGEGKEAKRASLPKGWTLDTVDHEKAIALLSLPRDIGLHPETG
KMISAGIGRYGPYVSHDGTFANLENVEEVFSVGLNRAVSVLADKQSKGGGRGRSTPAALA
TLGDHPDGGAITVRDGRYGPYVNWGKVNATLPKGKDPASVTLEEALALITEKAGSSKGRK
APARKSAASSEKKTTAKKTATKKAPAKAKSKAKAAEE

NT seq 2634 nt +upstreamnt +downstreamnt
atgaacgtcgtcgtcgtcgaatcgcctgccaaggccaaaaccatcaacaaatatctgggc
tcggactataaggttctggcctcctttggccatgtgcgggacctgccagccaaggatggc
tcggtgcgcccggacgaagattttgcaatgtcctgggaagtggacagcaattccgccaag
cgcctggcggatattgtaaaggcactgaaggacagcgacggcctcattctcgcaaccgac
cctgatcgcgaaggggaagccatttcctggcatgtgctggaagtgctgcggcagaaaaag
gcgctcaacggcaaaacggtgaagcgcgtggccttcaacgccatcaccaaaaaggccgtt
ctggatgcaattgcccatccacgcgatattgatgagccgctggtggacgcctatctcgcc
cgccgtgcactcgattatctggtcggcttcaccctttcgccggtgctctggcgcaagctt
cccggcgcccgctcggccggtcgcgtgcaatcggtagcgctgcgtctggtctgcgaccgc
gaagcggaaatcgaacgctttgtccgcgaggaatactggaatatcgcagcccttctcaag
acaccgcgcaatgacagtttcactgcccgcctcaccgcgcttgatggcaagaagcttgga
aagctcgatatcaagaacggcgaacaggccggtgccatccgcaccatgctggaaagcgcg
aacttcaaggctgtttccgtcgaggcaaagcctaccaagcgcaatccgggcccgccattc
accacctccaccttgcagcaggccgcctcggggcaattgggcttttctgcttcgcgcacc
atgcaggtggcgcagcgcctttatgaaggcgtggacattggcggcgaaacagccggtctc
ataacctatatgcgtaccgatggtgtgcagattgctcccgaagcgatcaatgccgcccga
gacgctatcgccaagagtttcggcgcgaaatatgtgcccgaaaagccgcggtattattcg
agcaaggccaagaatgcgcaggaagcgcacgaagcaatccgccccactgatttttcgcgt
catccaaaggatgtgcgccgctttctcgatgaggatcaggcccgcctttacgaactgatc
tggaagcgcgccattgcaagccagatgcaggccgccgatatcgagcgcaccacggtcgat
atcgaggccaccaacggttcacgcgccgccatgctgcgcgccaatggctcggtgacgaaa
ttcgacggcttccttgccgcctatatggatcatcgcgaggaggaggacgacgacgaagag
agtgcaaagctgccggaaattcgctccggcgaggcgcttgcccgcgaaaagatcgatgcg
acccagcattcgaccgaaccgccgccgcgctattcggaagcaacccttatcaagaagatg
gaagagttgggcattggccgtccttccacctatgccgcaacactcgccacgctgcgcgac
cgcgaatatatcatcatcgacaagcgcaagctgattcccgaagccaaggggcgccttgtg
acggcgtttcttgaaagcttcttcgagcgctatgtggaatatgatttcacggcagacctg
gaggaaaagcttgatcttatttccgatggcaaattgtcgtggaaagagattctgcgcgat
ttctggcgtgcattctccggctccgtcgaggacatcaaggaactgcgcgtcaccaatgtt
ctggatgcgctgaatgaggaactggctccgctggtctttcctgcgcgcgaggatggcagc
gacccacgctcctgccccacctgcggcaccggcacgctgtcgctgaagcttggccgctat
ggcgcttttgtcggctgctccaactatcccgaatgcaaatatacccgccagcttggtggc
gaggccaatggcgagacggcggcttccgacgagccgaagccgctcggcaaggatccgttc
accggcgaggaaatcaccgcacgcaccgggcgcttcggcccctatatccagcgcggcgaa
ggcaaggaagccaagcgcgccagcctccccaagggctggacgctcgacacggtggatcat
gaaaaggcgatagcactcctgtcgctgccgcgcgatatcggcctgcacccggaaaccggc
aagatgatttcggcgggcatcgggcgctacgggccctatgtcagccatgacggcacattc
gccaatctggaaaatgtcgaggaagtcttctcggtcggcctcaaccgtgcagtttccgtg
cttgccgacaagcaatcgaagggcggcggtcggggacggtccacaccggccgcgctcgcc
accctcggcgatcatcccgatggcggcgctatcaccgttcgcgacgggcgctacgggcct
tatgtaaactggggcaaggtcaatgcgacactgcccaagggcaaggatccggcatcggtg
acgctggaagaggcgctggcgctgattactgaaaaagccggttcgtcaaagggcagaaag
gcccccgcccgcaagtcggcggcaagttctgaaaagaagacaaccgcgaaaaagaccgct
acaaaaaaagccccggccaaagccaagagcaaggccaaggcggcagaggagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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