KEGG   Brassica napus (rape): 106354165
Entry
106354165         CDS       T04128                                 
Symbol
BNAA07G29500D
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
  KO
K02945  small subunit ribosomal protein S1
Organism
bna  Brassica napus (rape)
Pathway
bna03010  Ribosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    106354165 (BNAA07G29500D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:bna03011]
    106354165 (BNAA07G29500D)
Ribosome [BR:bna03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    106354165 (BNAA07G29500D)
  Bacteria
    106354165 (BNAA07G29500D)
SSDB
Motif
Pfam: S1 Stb3
Other DBs
NCBI-GeneID: 106354165
NCBI-ProteinID: XP_013649497
UniProt: A0A816ZJ21
Position
A7:24958037..24960323
AA seq 490 aa
MQTLLIQPSKSLFPSSIHSSGDVRDCIHFKPSEKASRFQFHRALSPSPFRSFAARRAYGI
RFCSRDGVSDVRNVAEVEEEEIELLNRPNPQKPEEEEKEKPDDDEILEPFLKFFKHGERE
EEEEEEEGDEESERLTVEYYDPKPGEFVVGVVVSGNENKLDVSIGADMLGTMLTKEILPL
YDKELDYLLCDLKYDAEEFLVHGKMGIVKDEEDDGVEVMEFARQGRPVVEVGTVIFAEVL
GRTLSGRPLLSSRRYFRRIAWHRVRQIKQINEPIEVKITEWNTGGLLTRIEGLRGFIPKQ
ELVKRVNSFTELKENVGRRLVVQITRLNEDKNDLILSEKTAWEKRYLREGTLLEGTVARI
LPYGAQVRLGESSRSGLLHISNITRRRIGSVSDVLQVDESLKVLVVKSLFPDKISLSIAD
LESEPGLFITNREKVFMEAEEMAQKYRAKMPTVTTRSEISTDHPPITSSFPQGKDEEIYA
NWDWFKFESQ
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgcaaacgcttctcattcagccatctaagtctctcttcccttcctcgattcacagctcc
ggcgacgtcagagactgtatccacttcaaaccatcggagaaagcttctcggtttcagttt
cacagagccctaagcccctctccgtttcgcagtttcgctgctcgaagagcctacgggatc
agattctgctcgcgcgacggcgtctccgatgtacgaaacgtggcggaggtggaggaggag
gagattgagctattgaacaggcctaatcctcagaaaccagaggaagaggagaaggagaag
cctgacgatgacgagatccttgagccgtttttgaaattcttcaagcatggagaacgagaa
gaagaggaagaagaagaagaaggagacgaagaatcggagagactcaccgtggagtattac
gatcccaagccgggtgaatttgtcgttggagttgtggtttcaggtaacgagaacaagctc
gatgtgagtataggtgcggatatgttggggactatgttgacgaaggagattcttccgtta
tacgacaaagagttggattacttgctgtgtgatttgaagtacgacgctgaggagttcttg
gttcacggtaaaatggggattgttaaggatgaggaggatgatggtgttgaggtgatggag
tttgcaaggcaagggaggcctgtggtggaggtagggacggtgattttcgcggaggttttg
gggaggacgttgagtgggaggcctttgctttcttctagacgttactttaggagaatcgct
tggcaccgtgtgaggcagattaagcagattaatgagcctattgaagtgaagataactgag
tggaatactggagggctgcttacccggattgagggtttgagagggtttattccgaagcag
gagctggtgaagagagtgaatagcttcactgagttgaaggaaaacgtgggtcgtagattg
gttgtacagattacgagattgaatgaagacaaaaacgacttgatactgagtgaaaaaaca
gcctgggagaagcggtaccttagagaaggaacactcttagaaggaacagttgccagaatc
ttaccgtatggagcccaagtcagactcggtgaaagtagtagaagtggactgctacacatt
tcaaacattacccgcagaagaattggatctgttagcgatgtgcttcaggtggacgaaagc
ttaaaggttctcgttgtgaaatctctatttccagacaagatctctctaagcattgcagat
cttgaaagcgagccgggtttgttcatcaccaacagagagaaagtgtttatggaggctgaa
gagatggcgcagaagtacagagcaaagatgcctacggtgacaacaagaagcgagatttct
actgatcatcctccgatcacaagcagcttccctcagggaaaagatgaagaaatctatgct
aactgggactggttcaagttcgagagtcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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