KEGG   Brassica napus (rape): 106355666
Entry
106355666         CDS       T04128                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106355666
Spliceosome [BR:bna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    106355666
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    106355666
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 106355666
NCBI-ProteinID: XP_048591678
Position
A7:complement(19186391..19189676)
AA seq 664 aa
MLDSIHMGRHDGSSEEDERVRRSDRERGHRGSNTRVTADKPSDDRQKSRSESERKQEGLL
KRDWSDSQRDKLRNEEKSEVAKPKLPELNPSDSNAMALGKTGGVYIPPFKLARMMNEVED
KSSVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS
PGFTDVFAALVAVINAKFPEVAELLLKRVVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV
AEEIIALELVSLLLETPTDDSVEVAVGFVTECGAILQDLTPKGLHGIFERFRGILHEGDI
DKRVQYLIEGLFAIRKAKFQGHPAVRPELDLVEEKYSHDVSLNDKISPDTSLDVFKPDPD
FIENEKKYEALKKELLGEDESEDEDGSDASSEEDGSDEEEDEEQMRIRDETETNLVNLRR
TIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMI
NKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDTLPWHVLAYIRLTEEDTTS
SSRIFIKILFQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLG
GITESLREYLKNMPRLIMQQQKQVAESESSSGSDSSESDSDTDSSSSSSSDESDREKRKR
RRRA
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgttggattccatccatatgggtaggcacgatggttcctccgaggaagacgagagagtg
agaagaagtgatagagagaggggtcataggggtagtaatactagggtcacagctgataag
ccttctgatgataggcaaaaaagtaggagtgaaagcgagaggaaacaagaaggtctctta
aagagagattggtctgatagtcaaagagacaagctgagaaacgaagagaagagtgaagtt
gcgaagcccaagttaccagaactcaacccgtctgatagcaatgctatggctttgggcaaa
accggtggagtttatatccctccgttcaagctagcacggatgatgaacgaggtggaggac
aagagcagcgtagagtatcagcgtcttacatgggacgctctccgtaaaagtatcaacggg
ctggtgaataaggttaacgcaagcaacatcaagaacattatccctgagctgtttgctgag
aatctcatcagaggaagggggcttttctgccgttcgtgtatgaagtctcagatggcgtct
cctgggtttaccgatgtctttgcagctttggtcgctgttatcaacgccaagttcccagaa
gttgctgagcttttgttgaaaagagtcgttttgcagctgaagagagcttataagcgtaac
gacaagcctcaactgctagctgctgtgaagtttatagcacatctagtaaaccagcaagtc
gctgaggagatcattgcgcttgaactagtctctttacttctggaaactccgactgatgac
agtgtcgaggtggccgttggattcgtgacagagtgtggtgcgatactccaggatcttaca
ccaaaaggattgcatggaatttttgagaggtttcgtggtatactgcacgaaggagatata
gataagagagttcagtatttgattgaagggctctttgctattaggaaagcgaagtttcag
ggacatccagctgttcgtccggagctagatcttgtggaagaaaaatattcgcacgatgta
tctcttaatgataaaatatctcctgatacctctctagatgtcttcaaacctgatcctgac
ttcattgagaacgagaagaagtacgaggcgctgaagaaggagttacttggtgaggatgag
tctgaggatgaagacggctctgatgctagctcagaggaagatgggtctgatgaagaagaa
gatgaagaacaaatgaggataagagatgagacagagacaaatcttgttaatcttaggagg
acaatatacctgaccattatgtccagcgtcgattttgaggaagctggtcacaagttactt
aaaattaaacttgaacctggtcaagagatggaactgtgcataatgcttctggagtgttgc
tctcaggagagaacgtatctgcgctactacggtttgttgggtcagcgtttctgtatgatc
aacaagattcaccaagagaatttcgagaagtgtttcgttcagcagtactctatgattcac
cgtcttgaaacgaacaagctgcgtaacgtggctaagtttttcgctcatttactgggcaca
gatactcttccatggcatgtgcttgcctatattcgtttaaccgaggaggacactacttca
tcttcccgtatcttcattaagatccttttccaggaattgtcagagcacttggggattagg
ctgcttaatgagaggcttcaggatccaacaatgcaggagtcacttgaatccatcttccct
aaagacaatccaaagaacactaggtttgcaatcaacttctttacctccattggtcttgga
gggatcaccgagagtctcagagagtatctgaagaacatgccacgcctcatcatgcaacaa
cagaagcaagttgcggagtcagaatcatcgtctggatcagacagttccgagtctgattct
gatactgattcatcttcttcttctagttcggatgaaagcgacagagagaagaggaagcga
agaagaagagcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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