KEGG   Brassica napus (rape): 106365752
Entry
106365752         CDS       T04128                                 
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic isoform X1
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
bna  Brassica napus (rape)
Pathway
bna00900  Terpenoid backbone biosynthesis
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
Module
bna_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    106365752
Enzymes [BR:bna01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     106365752
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     106365752
SSDB
Motif
Pfam: GcpE Sgf11 zf-RING_7
Other DBs
NCBI-GeneID: 106365752
NCBI-ProteinID: XP_013660691
UniProt: A0A078IUF6
Position
C9:51863445..51867891
AA seq 736 aa
MATGVLPAPFSGVNISDSKLGFGKSMNIVRSLRSARRRVSVIRSSNQGSDLAELQPASEG
SPLLVPRQKYCESLHKTVRRKTRTVMVGDVALGSEHPIRIQTMTTSDTKDIAATVEEVMR
IADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPSVALRVAECFDKIR
VNPGNFADRRAQFETIEYTEDEYQKELQHIEQVFTPLVEKCKEYGRAMRIGTNHGSLSDR
IMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMYVHGWD
YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCKRLANLGTN
AAELQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMTVSLDQLKA
PELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDHVARLALKRLIDVSMGVIAPLSE
QLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSVRGDEPYEELEVLKNIDATMILHDV
PFNEDNVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGALLVDGL
GDGVMLEAPDQDFEFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKT
SHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMSEATDALIG
LIKEHGRWVDPPVADE
NT seq 2211 nt   +upstreamnt  +downstreamnt
atggcgactggggtattgccagctccgttctccggggtcaacatctcggattcgaaactc
gggtttggtaaaagcatgaatattgtgaggagcttaagatctgctaggagaagagtttca
gtgatccggagttcgaatcaaggctctgatctagccgagcttcaacctgcttcagaagga
agccctctcctagtgccaagacagaagtactgcgagtcattgcataagacggtgagaagg
aagactcgtactgtcatggttggagacgttgcccttggcagcgaacatcccataaggatc
caaaccatgactacatccgatacaaaggatattgctgcaaccgttgaagaggttatgaga
atagctgataaaggagctgacattgtgaggatcactgttcaagggaagaaagaggcagac
gcatgctttgaaatcaaagacaaacttgttcagcttaattataacatcccccttgtggcg
gacattcattttgctccttctgtagccttgcgtgtagctgaatgctttgacaagatccgc
gtcaaccccggaaactttgcggacagacgggcccagtttgagacgatagagtacacagaa
gatgaataccagaaagaacttcagcatatcgagcaggtcttcactcctttagttgagaaa
tgcaaagagtatgggagggcaatgcgtatagggacaaatcacggaagtctttctgaccgc
atcatgagctattatggtgactctccacgaggaatggttgaatcagcgtttgagtttgca
cggatatgtcggaaactagactaccacaacttcgttttctcgatgaaagctagcaacccg
gtgatcatggtccaggcctaccgtttgctcgtggcggagatgtatgttcatggatgggat
tatcctctgcatttgggagtcactgaagcaggtgaaggtgaagacggacggatgaaatct
gctattgggattggaacgcttcttcaggatggactaggtgacacaataagagtttcgctg
actgagccaccagaagaggagattgatccgtgtaagcgattggccaacctcggaacaaat
gctgctgagcttcaacaaggcgttgcaccgtttgaagagaagcataggcattactttgat
tttcagcgtaggactggtgatctacctgttcagaaagagggagaagaggttgattacaga
aacgtacttcaccgtgatggttctgttctgatgacggtttctctagatcaactaaaggca
cctgaactcctctacagatcgcttgctacaaagcttgtcgttggcatgccattcaaggat
ctggcaacggttgattccatcttacttagagagctaccacctgtggatgatcacgtggct
cgtttggctcttaaacggttgatcgatgtaagtatgggagtcatagcacctttatcagag
cagctcacaaagccattgcccaatgcaatggttcttgtcaacctgaaggaactatctggt
ggtgcttacaagcttctccctgaaggtacacgcttggttgtctctgtacgaggtgatgag
ccatacgaggagcttgaagtactcaagaacatcgatgctacgatgattctacatgatgta
cccttcaatgaagacaatgttagcagagtacatgcagctcggagactattcgagttccta
tccgagaattcagttaattttcccgtcattcaccacattaacttcccaacagggattcac
agggacgagttggtgatccacgcagggacatacgctggggcacttctagtggatggactt
ggagatggtgtaatgctagaagcacctgatcaagacttcgagtttcttaggaacacttct
ttcaacttgttacaaggctgcaggatgcgtaacaccaagacggaatacgtatcgtgcccg
tcttgtggaagaactctgttcgacttgcaagaaatcagcgctgagatcagagaaaagact
tcgcatttgcctggcgtttcgattgcaataatgggttgcattgtgaatggacctggcgaa
atggctgatgctgatttcggttatgtaggcggttctcccgggaaaatcgacctttacgtt
ggaaagacggtggtcaagcgtgggattgccatgtcggaggcaactgatgctctgatcggt
ctgatcaaagaacatggtcgttgggtcgacccaccggttgctgatgagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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