KEGG   Brassica napus (rape): 106367959
Entry
106367959         CDS       T04128                                 
Name
(RefSeq) serine hydroxymethyltransferase 3, chloroplastic
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bna  Brassica napus (rape)
Pathway
bna00260  Glycine, serine and threonine metabolism
bna00460  Cyanoamino acid metabolism
bna00630  Glyoxylate and dicarboxylate metabolism
bna00670  One carbon pool by folate
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
bna01200  Carbon metabolism
bna01230  Biosynthesis of amino acids
bna01240  Biosynthesis of cofactors
Module
bna_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    106367959
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    106367959
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    106367959
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    106367959
Enzymes [BR:bna01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     106367959
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 106367959
NCBI-ProteinID: XP_013663312
Position
A1:2819410..2822654
AA seq 529 aa
MEACCGATSMGSLQQSGGVQRPVFAPVMSPVNKFSQQLKFNFAGPNRSLFLKRSLVVERK
ASSVSVPAVETSNNEIPFEDYGRSEVDPEVDEIIKKEKNRQFRSLELIASENFTSRAVME
TVGSCLTNKYSEGLPGKRYYGGNEFIDQLETLCQNRALATFRLDSTKWGVNVQPLSGSPA
NFAVYTAILKPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY
DMLEKTAVLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD
PFEYCDIVTTTTHKSLRGPRGGMIFFKKDPVNGVELESAINNAVFPGLQGGPHNHTIGGL
AVCLKHAQSPEFKAYQKRVVANCKALANRLVELGFDLVSGGSDNHLVLVDLRPLGMDGAR
VEKILDMASITLNKNSVPGDKSALVPGGIRIGTPAMTTRGLTEKDFVVVADLIKEGVEIT
MEAKKLVSGTKLGEFTKLVTSPDFPLREKVESLKERVESFTSRFPIPGV
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggaagcttgttgtggagctacttcaatgggttctcttcagcaatctggaggggttcaa
agacctgtctttgctccagtaatgtccccagtgaacaagttttctcagcaactgaaattc
aattttgccggacctaaccgttctttgtttctgaaaagaagcctggtcgttgaaaggaaa
gcgtcttctgtctcggtacctgctgtggagactagcaacaatgaaatcccttttgaggac
tatggtcgttctgaagttgatccagaggtcgatgagattatcaaaaaggagaaaaacaga
cagttcaggagcttggagcttattgcttccgagaatttcacatcccgagctgttatggag
actgttggatcatgccttaccaacaagtattctgagggtctacctggtaaaaggtattat
ggtggcaatgagttcatcgatcagctggagacactttgccagaacagggctttagctacc
ttccgcttagattcaaccaaatggggagttaacgttcagcccttatctggttcacctgca
aactttgctgtgtacactgccatacttaagcctcatgatcgaatcatgggtttggattta
cctcatggaggccatctgtcacacgggttcatgactgccaaaaggcgtgtatctggaact
tcaatttactttgagtccatgccttatcgacttgatgaatcaacaggcattgtggactat
gatatgctcgagaaaactgctgtgctgttccgaccaaagcttataatcgcaggagctagt
gcctacagccgagatttcgactatcctcgcatgaggaagattgcggactcagttggtgct
tttctgatgatggatatggctcatatcagtggacttgtggctgcctctgtggttgccgat
ccttttgagtattgtgatattgtcacaaccaccactcacaagtctttgaggggtccgaga
ggtggaatgatcttcttcaagaaggatccagttaatggggttgaacttgaatctgccatt
aacaacgctgtcttccctggtctacagggtggacctcataaccacacaattggaggatta
gcagtctgcttgaaacacgcacagtcgcctgaattcaaggcttaccagaaaagagttgtg
gctaactgtaaggctctagctaaccggttggttgaactcgggtttgatctggtttctggt
ggcagtgacaatcatctggtccttgttgatcttagaccattgggcatggatggtgctcgg
gttgagaaaatcttagacatggcgtccattacactcaacaagaactctgtccctggggat
aagagtgcgttggttccagggggaataaggataggaacacctgcgatgacgacaagagga
ctaacggagaaagactttgtggtggttgctgacttgatcaaggaaggtgtggagatcact
atggaagccaagaagctggtttcaggaacaaagcttggagagttcaccaagctggtgaca
tctcctgacttcccattgagagagaaggtggagtctctcaaggagagagtcgaatcattc
acctctcgtttccccattcctggagtttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (9)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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