KEGG   Brassica napus (rape): 106371168
Entry
106371168         CDS       T04128                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Module
bna_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106371168
Enzymes [BR:bna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     106371168
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 LytB_SH3
Other DBs
NCBI-GeneID: 106371168
NCBI-ProteinID: XP_013666657
UniProt: A0A078IAT1
Position
A10:complement(2379586..2382882)
AA seq 431 aa
MYLIVPVDSNNEPFMHYIYTHASNPKSKHKLKLTQLTMTKSQITVAILFTLLTFIDVSTS
SSNVFNVVSFGAKPDGVTDSTAAFLKAWQAACVAAYSATVMVPAGTFLVKGITFTGPCKS
KLKFQVAGTVVAPADYWAFGNSGYWILFNRVSKMSLVGGTFDARASGFWACRKSGQNCPP
GVRSITFNAAKDVVISGVKSMNSQMSHMTLKGCTNVAVRNIKLVAPGNSPNTDGFGVQSS
TGITLTGSTVQTGDDCVSIGPGTRNFLISKLNCGPGHGVSIGSLAKTLNEDGVENVTVSN
SVFTGTTNGVRIKSWARASTGFVNKVFFQNLIMKNVQNPIIIDQNYCPTHQGCPTEHSGV
KISQVTYRNIQGTSATQQAMNLACSKTNPCTGITLQDIKLTYNKGTPATSYCFNAAGTNL
GVIQPTSCLNK
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtacttaatcgtacccgtagactccaataacgagccattcatgcactatatatacact
catgcatcaaaccccaaatcaaaacacaaactcaaactcacacaactaacaatgacgaaa
tcacaaattacagtagcaattctcttcaccctcctcaccttcatcgatgtctcaaccagc
tcctccaacgtattcaacgtcgttagcttcggggccaaacctgacggagtcacggactcg
acggcagcattcctcaaggcatggcaagcggcttgtgtcgcggcatattcagccactgtg
atggttccggctggtacgtttctagtgaaggggataacgtttacagggccatgcaagagc
aaactcaagtttcaagtagccggaaccgtggttgctccggcagattactgggcatttgga
aactccggctactggattctcttcaacagggttagcaaaatgtcacttgtcggtgggact
ttcgacgcccgagctagtgggttctgggcttgccggaaatctggtcagaattgtcctccc
ggtgttaggtccataacgttcaacgcggcaaaagacgtggtcataagtggagtgaaatcg
atgaacagtcagatgtcccatatgaccctcaaaggttgcaccaatgtggccgtccgtaac
atcaagctagtcgctcccggaaacagcccaaacaccgacggttttggcgttcaatcctcc
acaggaatcacactcaccggaagcacagttcagaccggagacgattgtgtttctatcggc
cctggcacccgcaacttcctcatctccaaacttaattgtggcccaggtcatggggttagc
attgggagcttggcaaagacattgaacgaagatggagtagaaaacgtgacagtatcgaat
tccgtattcaccgggacaacaaacggcgtaaggataaagtcgtgggcgagggcgagtact
ggattcgttaataaagtcttcttccaaaacctaatcatgaagaacgtccaaaaccctatc
ataatcgaccaaaactattgtcctacccaccaaggttgccctaccgagcattcaggggta
aagattagccaagtgacgtataggaacatacaaggaacgtccgcgacacagcaagcgatg
aatctggcatgcagcaagaccaatccatgcactggaatcacattacaagacattaagctt
acttacaacaaaggaactcctgctacttcctactgttttaatgctgctggaactaatctc
ggtgttattcagcctacgagttgtctaaacaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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