KEGG   Brassica napus (rape): 106381444
Entry
106381444         CDS       T04128                                 
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4-like
  KO
K15450  tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bna03016]
    106381444
Enzymes [BR:bna01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.282  tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
     106381444
Transfer RNA biogenesis [BR:bna03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    106381444
SSDB
Motif
Pfam: TYW3 Met_10 Kelch_4 Kelch_1 Kelch_3 Kelch_5 Kelch_6 Kelch_2 MTS DNA_methylase Cons_hypoth95 Methyltransf_15 FtsJ
Other DBs
NCBI-GeneID: 106381444
NCBI-ProteinID: XP_013676799
Position
C3:20731593..20736339
AA seq 991 aa
MEFEKRKAATLASIRSSVTDKSPKGFLDEPILHLLETINHHPSYFTTSSCSGRISILSQP
KPQSTNPSTKKKARGGSWLYITHDPADPESVLHLLFPPHPPTQITDPLGQPSELVFRFEP
LIIAIECKDVRSAQFLVATAISAGFRESGITCCGEGKRVIIAIRCSIRMEVPLGDTGKVM
VSREYVRFLVDVANEKMVANRKRTDGFGLALLSNGFKNPDDANDVEEEDNFENLAENHES
SINNGDLLPGPHQDLMPLSTISITGESVEKLHLWGHAACTIDKTDRKEVIVFGGFGGFGR
HARRNESMLLDPSCGTLKLVAVNESPSPRLGHTASMVGDCMFVIGGRADPLNILNDVWML
DISKCEWSSQRCIGCEVPPRHRHAAASIGSNVYIFGGLNQDKILSSLHFLDTKNLQWKEI
EQRGPWPCARHSHDMVAYESQLFMFGGYNGEKVLDDLYSFDVQSCSWKLEMVSGKWPQAR
FSHSMFVYKHVIGIIGGCPVSQNCHDLVLLDLKHRLWRSVRLDFMNRELLVRSTASVIGD
DLIVIGGGAACYAFGTKFSEPVKINLLQSLTMSENDVKASIEVKTEASLSQPCVIQLERK
YAKLGKDILKNFGWLDLERKVYSHEKGLYICFPVTEKLSALFHEKQLLDKDLEGSEDNHL
TSQLTKGLSLKEISSSVALNLLKELGARKFTNVAVEAKKVAKSPLQRMKEAVTSILKQKG
LPEELLDELPQKWERLGDIVVLPVTSFKDPAWSSISEEVWSAVAISLSANRLARQGRVEA
NGTRDSTLEILVGDDGWVDHRENGILYSFNATKCMFSWGNLSEKLRMGNVACENEVVVDL
FAGIGYFTLPFLVRAKAKLVYACEWNPHAIEALRHNVEANFVSDRCIILEGDNRINAPKG
VADRVCLGLIPTSEGSWVTAIQALRPEGGILHVHGNVKDSDVSSWSEHVSKSLGDIARAE
GRSWEVTVEHIEKVKWYAPRIRHLVADVRCR
NT seq 2976 nt   +upstreamnt  +downstreamnt
atggaattcgagaagaggaaagccgcgacgctagcttcaatccgctcatcagtaaccgac
aagtctccgaaaggcttcctcgacgagcccatcctccatctcctcgaaaccatcaaccac
cacccttcctacttcaccaccagctcctgctccggtcgaatctcaatcctctcccaaccc
aaaccgcaatcaacaaacccttcaaccaagaagaaagctcgcggaggctcgtggctctac
atcacgcacgatccggcagatccggagtcagtactccacctcctcttccctccacatcca
ccaactcagattactgatccgctcggtcagcccagcgagttggtcttccgattcgagccg
ttgatcatcgcgatagagtgcaaggacgtgaggtctgctcagtttctcgtggcgacggct
atctccgcggggtttagagagtcggggatcacgtgttgcggcgagggtaaaagggtaatt
atagctatacggtgttcgattcggatggaggtgcctttgggtgatacggggaaggttatg
gtttcgcgggagtatgtgaggtttcttgttgatgttgctaatgagaagatggttgctaat
aggaagaggactgatgggtttggtttagctttgttaagtaacggtttcaagaatccagat
gatgctaatgatgtggaggaggaggataatttcgagaatctagctgagaatcatgagtcg
agtatcaacaatggtgacttgcttcctgggcctcatcaagatcttatgccgctctcaaca
atatccatcaccggggaatctgttgagaagcttcacctttggggacatgcagcttgtacg
atagataaaacagaccgaaaagaagttattgtgtttggtggctttggcggttttggtaga
catgctcgacgaaacgagtctatgttgcttgacccttcatgcggcaccttaaagttggtc
gcagtcaatgaatctccttcaccacgacttggacatactgcttcaatggtgggcgattgc
atgtttgtgattggaggaagagctgatcccttaaatattctgaatgatgtgtggatgctt
gatatatcaaagtgtgaatggagctcacagagatgcattggatgtgaagttcctccgagg
catcgtcatgcagcagccagtattggctcaaatgtttatatattcggtgggcttaaccag
gataagatattatcctcgttgcactttttggatacaaagaaccttcagtggaaagaaatt
gaacagagaggtccatggccctgtgcgcgccattctcatgatatggttgcatatgagtct
cagttattcatgttcggaggatacaacggtgaaaaggtactagatgatctatatagtttt
gacgtccaaagctgttcttggaaacttgaaatggtttcaggaaaatggcctcaggccagg
ttctcacactcgatgtttgtgtataaacatgttattggcataattggaggctgccctgtt
tcacaaaactgtcatgatttggttctgcttgatctaaagcaccgtttgtggaggagtgtg
agactggactttatgaacagagagttgttagttcgaagtacagctagtgtaattggggat
gatcttatcgttattggtggtggagctgcttgctatgcttttgggacaaagtttagcgaa
ccagtgaaaatcaacttgcttcaatcattgactatgagtgaaaatgatgttaaggcttct
atagaagtgaagactgaagcttctctgtctcaaccctgtgtcatacagttagaaagaaag
tatgcaaagttgggcaaagacatacttaaaaactttggatggttagaccttgagaggaaa
gtttattcacacgagaaaggtctttatatctgcttccctgttaccgaaaagttgtctgct
ctctttcatgaaaagcagcttttggacaaggatttagaagggtcagaagataatcacctt
accagccaactcacaaagggtctatcactgaaggaaatatccagctccgtggctttgaat
ctgttaaaggaacttggtgctagaaaattcactaatgtagctgttgaagccaaaaaagta
gcaaagtcccctttacaaagaatgaaagaagctgttacgtctatacttaaacagaaaggt
ctacctgaggagcttttggatgagcttccacagaaatgggaacggcttggagatattgtt
gtacttcctgtaacatcttttaaagatccagcttggagctctataagtgaggaagtttgg
tctgctgttgctatatcccttagtgccaaccgtcttgcacgccaaggacgtgtggaagcc
aacggtacaagggatagtacattggagattcttgtgggagacgatggatgggttgatcac
cgtgaaaatgggatcttgtactcttttaacgctaccaagtgcatgttctcatggggtaat
ctctcagaaaagctacgtatgggtaacgtggcctgcgaaaatgaggttgtggtggacctg
tttgctggaatcggatactttaccctcccattccttgtgagggcaaaggcaaagctggta
tatgcttgtgaatggaatcctcatgctattgaagcacttcgtcataacgttgaagcaaat
tttgtttctgaccgttgtatcattcttgaaggggataacaggatcaatgcacccaaagga
gtagctgacagagtctgtctcggtcttatcccgaccagcgaaggaagctgggtcacagct
attcaggcgttaaggccagagggaggaatactccatgtgcatggaaacgtcaaggactcg
gatgtgagcagttggtccgagcatgtatccaaatcattaggtgatatcgccagagccgaa
ggtcgtagctgggaagttacagtagaacatatagagaaagtgaaatggtatgctcctcgg
attcgccatcttgtagccgatgtgagatgcagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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