KEGG   Brassica napus (rape): 106387978
Entry
106387978         CDS       T04128                                 
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
bna  Brassica napus (rape)
Pathway
bna03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    106387978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bna03032]
    106387978
   03400 DNA repair and recombination proteins [BR:bna03400]
    106387978
Enzymes [BR:bna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     106387978
DNA replication proteins [BR:bna03032]
 Eukaryotic type
  DNA Topoisomerases
   106387978
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     106387978
   FA (Fanconi anemia) pathway
     106387978
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-GeneID: 106387978
NCBI-ProteinID: XP_013683386
Position
C3:complement(10117867..10123186)
AA seq 865 aa
MAHLPRVLMVAEKPSIALSIATVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGH
VFSVDFPEKYQNWSTIDPQDLFDAPIQKKESNPKAHICRHLSNEARGCSYMVLWLDCDRE
GENICFEVIECTGFDMKDSKRKVYRAKFSSVTEKDISKAMDNLVEPNRDEALAVDARQEI
DLKVGVAFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMQINTFKPEKFWSLR
PHLMKDGYELQLEWDRRRLFDLEAAVVFQKLVVEGRTAKVIDVSEKQEVKGRPTGLNTVN
LLKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGG
YVQRLLSDGFQKPKSGTDAGDHPPITPMRAATEGIVGGDAWRLYQYVCQHFIGTVSPNCK
YLRTKVELSIGGEIFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGEKIEVSRVELYEG
NTSPPDFLTESELISLMEKHGIGTDASIPVHINNIGERNYVQVQSGRKLVPTALGITLIR
GYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDAL
FEAQFSPLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKEITC
PLDNFELVIYSVPGTEGKSFPLCPYCYNSPPFEGIDTLFGAAKTANASAKTKTGSGMPCS
LCPHPTCPHSLRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCIVMLPEGAHRIATTS
NRCPECDSAIIEIDFNKKTTPLENGATLHQGCVLCDELLLSLVEVKHGRSFVRRGGRGRG
RGRGRGRGGRRGSKAVDPKMSFRDF
NT seq 2598 nt   +upstreamnt  +downstreamnt
atggcgcatctccccagagttcttatggtggcggagaagcccagcattgctctctccata
gctacagttctctctcatggacagatgtctacaaggagaggcagtacagaggtgcatgaa
tttgatgggatgttcagaggcttcaaagcacactatagagttacatctgttattggacat
gttttcagtgtagatttcccagaaaaatatcagaattggtcaaccattgatccgcaagat
cttttcgacgctccaatccagaaaaaagagtcaaacccaaaggctcatatttgtaggcat
ctaagtaatgaagctcgtggttgcagttacatggtgttgtggttggattgtgatcgtgaa
ggggagaatatatgctttgaagttatcgagtgcactggcttcgacatgaaagatagcaag
agaaaggtttatcgggcaaaattttcttctgttactgagaaagacatatcaaaggccatg
gacaaccttgttgaaccaaacagggatgaggcactcgcagtagatgctcgtcaagagatt
gatctaaaagttggcgtggcattctcgcgattccaaacaagttatttccaaggcaaatat
cagaatcttgactgcagagttatctcctatgggccatgccagactcctactcttgggttc
tgtgtgcaacgttacatgcagattaatactttcaagccagaaaagttttggtctctacga
cctcatttgatgaaggatggttatgagcttcaactagagtgggatagacgtagattgttc
gacctggaagctgctgttgtgtttcaaaagttggttgtggaaggcagaactgcaaaagtg
attgacgtatcagaaaagcaggaagtcaaaggtcgtccaactggtcttaacacagtgaat
ctgctaaaggttgcttcaagtgctctagggtttgggcctcagactgctatgcatcttgcc
gagagattgtatactcaaggcttcatcagctatccgcgcacggaaagcacagcctaccct
tcttcattcgacttcacagacacactcagagcacaagttagcaatccagtatggggtggt
tacgtacagagacttctctcagacggctttcaaaagccaaagtcaggaaccgatgctgga
gaccatcctcctatcacaccaatgcgagcagcaaccgagggcattgtcggaggagatgct
tggcgtctctatcagtatgtctgtcaacactttattggcactgtctcacctaactgcaag
tacctaaggaccaaagtggaattgtcaattggtggagaaattttccattgtactgggcag
cgtgtgacggaaaaggggtttacagctataatgccatggtctgcagtagacgagaagaaa
ctcccttcttttctcaaaggagagaagattgaggtttcgagagtggagttgtacgagggg
aacacttcgcctccggacttccttactgagagtgagcttatatctctcatggagaagcat
ggaataggtacagatgcatcaatacctgtgcatataaacaacattggtgaacgtaactat
gttcaggtccaatctgggaggaaattggttccaacggcactaggaatcacgctgataaga
ggctatcaatgcattgatccagacctttgcttaccagacatccggagctttatcgagcaa
caaatcactcttgttgccaagggccaagccgaccattcacacgttgtgcagcatgtgatt
cagcaattccggcgtaaattcagctattttgttcaacagatcgagcacatggatgccctc
tttgaagcacaattctctcctctggctgattctggtcgcgctttaagcaaatgtggcaaa
tgcttgcgatacatgaaacacatcacagcagtgccaccacgtctcttctgtggcacatgc
gaagaagtttattatcttccccagaagggcacagtcaagctatacaaggaaatcacatgt
cctttagacaacttcgagctcgtgatctactcggtgccaggaaccgaggggaagtccttt
ccgctgtgtccatactgctacaactctcctccgttcgaaggaatagacacactctttgga
gctgctaagacggctaatgcttctgccaaaaccaaaaccggttcaggcatgccgtgttcc
ctctgtcctcatcccacatgcccacactctttgagaaaccaaggagtctgcgcttgtcca
gagtgtgaaggcacactcgtcttggacccggtgagcttccccaagtggaaacttaactgc
aacttgtgtagctgcatcgtaatgcttccggaaggtgctcaccgcatcgctactactagt
aaccgctgtcccgagtgcgattcagccatcatagaaattgacttcaacaagaaaactact
cctctggagaacggcgccactctgcatcaaggatgcgttctctgtgatgagttgctgctc
tcgctggttgaagtcaaacatgggagatcctttgtgaggcgtggaggaaggggaagagga
cgagggagaggccgaggcagaggagggagaagaggatcgaaagctgtcgatccaaaaatg
agtttcagagacttttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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