KEGG   Brassica napus (rape): 106389120
Entry
106389120         CDS       T04128                                 
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
bna  Brassica napus (rape)
Pathway
bna03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106389120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106389120
   03110 Chaperones and folding catalysts [BR:bna03110]
    106389120
   03029 Mitochondrial biogenesis [BR:bna03029]
    106389120
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bna04147]
    106389120
Enzymes [BR:bna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     106389120
Messenger RNA biogenesis [BR:bna03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     106389120
Chaperones and folding catalysts [BR:bna03110]
 Heat shock proteins
  HSP60 / Chaperonin
   106389120
Mitochondrial biogenesis [BR:bna03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    106389120
Exosome [BR:bna04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106389120
  Exosomal proteins of other body fluids (saliva and urine)
   106389120
  Exosomal proteins of breast cancer cells
   106389120
  Exosomal proteins of colorectal cancer cells
   106389120
  Exosomal proteins of bladder cancer cells
   106389120
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 106389120
NCBI-ProteinID: XP_013684767
Position
C3:26819285..26822740
AA seq 596 aa
MASIFTATSSLGPLVAPISPKLSSATSISSSSFGRRQNVCPRRPRPAIVCAAKELHFNKD
GSTIKKLQTGVNKLANLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENI
GAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVH
ELKLMSKEVEDSELADVAAVSAGNNLEVGNMIAEAMSKVGRKGVVTLEEGKSAENHLYVV
EGMQFDRGYISPYFVTDTEKMSVEYENCKLLLVDKKVTNARDLVGVLEDAIRGGYPILII
AEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLD
KAGKEVLGNASKVVLTKEMTTIVGDGSTQEAVNKRVVQIKNLIEQAEQDYEKEKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVAEGIVVGGGCTLLRLAAKVDAIK
DTLGNDEEKVGAEIVKRALRYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYED
LMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggcatcgatattcactgctacatcttcacttggtcccttggttgctcccatttccccc
aagctttcttctgcgacttctatctcttcaagctcatttggaaggagacagaatgtgtgc
ccaagaagaccccgtcctgccattgtttgtgcagccaaggagttgcatttcaacaaagat
ggttccaccataaagaaacttcaaaccggtgttaacaagctagccaaccttgttggtgtc
acacttggaccaaaagggagaaacgttgttcttgagagcaagtatggatctccaaaaatt
gttaatgatggtgttactgttgctagagaggtcgagttggaggacccggttgagaacatt
ggtgcaaagcttgtaaggcaagcagctgcaaagaccaatgacttggctggtgacggtaca
acaacatccgttgttcttgcacaaggttttattgctgagggtgtcaaggtggtggctgca
ggtgcaaaccctgtgttaataactagaggcattgagaaaacagcaaaggctttggttcac
gagctgaagctaatgtccaaggaggttgaagatagtgaacttgctgatgtggcggctgtt
agtgccgggaacaaccttgaagttggaaacatgattgctgaagcaatgagcaaagtggga
aggaaaggtgtggtgacacttgaggagggcaaaagcgctgagaatcacctttacgtggtg
gaaggcatgcagtttgaccgtggttatatctccccatacttcgttacagacactgagaaa
atgtctgtggagtatgaaaattgcaagctgcttcttgttgacaagaaggttaccaatgca
agagaccttgttggtgttctagaggatgctattagaggcggataccctatcctaatcatt
gcagaagatattgaacaagaagctttggctactcttgttgttaacaagcttagaggcacg
ttgaagatcgcagctcttaaagctcctggatttggagagcgcaagagccagtaccttgat
gatatcgccattctaactggagcaactgtgataagagaggaagttggtctttctcttgac
aaagctgggaaagaggttttaggtaacgcctctaaggttgtcctcaccaaggagatgacg
accattgtgggtgatggtagcacacaggaagccgtgaacaagcgtgttgtacagattaag
aatttaattgagcaagcagagcaagactatgagaaggagaagttgaatgagagaattgca
aagctttctggtggagttgctgtcatccaggttggagcacaaactgagacagagctcaaa
gaaaagaagctaagagttgaagatgctcttaatgccacaaaggctgcggttgcggaaggc
attgttgttggtggtggttgcactctacttcgtcttgcagccaaggtagatgctatcaag
gataccctaggaaacgatgaagagaaggttggagcagagatcgttaaaagagcattgaga
taccctctgaagttgatagcaaagaatgctggtgtcaacggaagcgttgtcagtgagaag
gtgctagctaacgataacgtgaagttcggatacaatgctgcaactgggaagtatgaagat
ctgatggcggcaggaatcatcgaccccacaaaggttgtgagatgttgcttggaacatgcg
gcctcggttgcaaaaacgttcttgatgtctgactgtgtggttgttgagatcaaggagcca
gagccagttcctgttggcaacccaatggacaattcaggatatggatactga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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