KEGG   Brassica napus (rape): 106399607
Entry
106399607         CDS       T04128                                 
Name
(RefSeq) ribosome biogenesis protein bms1-like
  KO
K14569  ribosome biogenesis protein BMS1
Organism
bna  Brassica napus (rape)
Pathway
bna03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106399607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bna03009]
    106399607
Ribosome biogenesis [BR:bna03009]
 Eukaryotic type
  90S particles
   GTPase
    106399607
SSDB
Motif
Pfam: RIBIOP_C AARP2CN GTP_EFTU AAA AAA_16 AAA_22 AAA_28 nSTAND3 RNA_helicase AAA_5 AAA_19 MMR_HSR1 AAA_11 NACHT
Other DBs
NCBI-GeneID: 106399607
NCBI-ProteinID: XP_013695527
Position
C5:complement(2541510..2547437)
AA seq 1163 aa
MAADDLMSSQKSHRMRKSGPTMRKKSEIDKKKRGVADNKQPNPRAFSVRSVVKAKRLKIR
AVEKEQRRIHLPTADRTYGEPPPFVVVVQGPPGVGKSLVIKSLVKHFTHQNVPEVRGPIT
IVQGKKKRIQFVECPNDINGMIDCAKVADLAILLIDGSYGFEMETFEFLNIMQVHGFPKV
MGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYNGAKLFYLSGLIHGKYSQREVLNLSRFI
SVIKFHPLSWRTSHPYVLADRLEDVTPPEKVQMDKKCDRNITLYGYLRGCNLKKGMKVHI
AGVGDYSLAGVTALPDPCPLPSAAKKKGLRDREKLFYAPMSGIGDLLYDKDAVYININDH
LVQYSKTDEENGEPANKGRGKDVGEDLVKSLQNTKYSVDEKLDKTFINLFGKKTSASSER
KLEADAQSSPEGSDAESSEESQSDDDVDDHEMDVDSNDGKIKEKTELRGGRLRRKAIFKD
EVDDSDEDGDDDDEEAEDAESDGNEDEDGEDESVSDSQDSDEDDVEESEDKVLGNISKWK
EPLKEKGRKKNPNLMQIVYGASASSATALINENNEISDDEDFFKPKGEHSKNLGGGLDAG
HVNSEDCSKFVNYGNLKNWKEKEVCEDIRDRFTTGDWSKAALRNKNSVAGDEGEDDELYG
DFEDLETGEKHNDHENMESGTNEDVEAAERRLKKLALRAKFDAQSDKSELEDEDNDNGDG
INPRNSEAKEPGFVDKLKEELEIRKQMNLLELNDLDEDTRIEIEGFRTGTYLRLEIHNVP
YEMVDFFDPCHPVLIGGIGFGEDSAGYMQARLKKHRWHKKVLKTRDPIIVSIGWRRYQTI
PVYAIEDRNGRHRMLKYTPEHMHCLAMFWGPLVPPNTGFVAFQNLSSNQTGFRITATSVV
LEYNHQTHIAKKIKLVGHPCKIKKNTAFIKDMFTSDLEIARFEGSSVRTVSGIRGQVKKA
GKNMLDNNAQEGIARCTFEDQIKMSDIVFLRAWTPVEVPQFYNPLTTALQPRDKTWTGMK
TFRELRSEHNIPIPVNKDSLYKPIERKTKKFNPLVIPKKLQAELPFASKPKNKPARKRPD
LDARRAVVMEPEERKAHAVVQHYKLISKVKTNKKKAKEQEKRKAYEAEKAKKEVVSKKRN
REERRERYRTEDKQKKKMRRGQD
NT seq 3492 nt   +upstreamnt  +downstreamnt
atggccgccgacgatttgatgtcgtcgcagaagtcccacaggatgcgcaaatcgggtcct
acgatgcggaagaaatctgagattgacaagaagaagcgcggcgtcgcggataacaagcag
ccaaaccctagagcgtttagcgttaggtcggttgttaaggcgaagcgtttgaagattcga
gctgtggagaaggagcagcggcggattcatcttccgactgctgatcgtacttacggagaa
cctcctcctttcgtcgtcgttgttcaagggcccccaggggttggaaagtctttagtgatt
aagtcccttgttaagcattttacgcaccagaatgtgcccgaggttcgaggacctattacc
attgttcaaggtaagaagaaacggatacagtttgtggagtgccctaatgatatcaatggg
atgattgattgtgccaaggttgctgatctagctatacttctcatagacggtagttatggt
ttcgagatggaaacctttgagttcctaaatattatgcaagtgcatggattccctaaagtt
atgggagtcctcactcatctggataagttcaaggatgtgaagaagttgaggaagacaaag
caacgtctcaagcatcgtttctggactgagatttataatggagctaaattgttctattta
tctggtctcattcatgggaagtattcacaacgtgaagttcttaacttgtcccgctttata
tctgtcatcaagtttcatccgttgtcatggagaacatcacatccttatgtgttggctgat
cgtctggaagatgttacccctcccgagaaagttcagatggataagaaatgcgataggaat
atcacattgtatggttaccttcgtggttgtaacttgaagaaagggatgaaggttcacatt
gctggagttggtgactatagtttagctggggtgactgccttacctgatccttgtccttta
ccctcagctgccaagaaaaaggggctgagggacagagaaaagcttttctatgctcctatg
tccgggattggagatcttttgtatgacaaagatgctgtttacatcaacataaatgatcac
cttgttcagtactctaaaaccgatgaagaaaatggagaacctgctaataaaggaaggggc
aaggatgttggtgaggatttggtgaagtcgttgcagaacacaaaatattctgttgatgag
aaattggataagactttcattaatttatttggcaaaaagactagtgccagctcggaaaga
aaacttgaggcagatgcgcaatcgtcaccggaaggttctgacgctgagtcatcagaggaa
tctcagtctgatgatgatgttgatgatcatgaaatggatgtagatagtaatgacggtaaa
attaaggagaaaaccgagctccgtggtggaaggctgaggaggaaagctatcttcaaggat
gaggttgatgactcagatgaagatggtgatgatgatgatgaggaagcagaagatgctgaa
tctgacggaaatgaagatgaagatggggaagatgaatctgtttccgattctcaggactca
gatgaagatgatgttgaggaatcagaagataaggtccttggtaacatatcaaaatggaaa
gaacccttaaaagaaaagggcagaaagaagaacccgaacttgatgcaaattgtgtatggt
gcatcagcatcatcagctactgccttgataaacgagaacaatgaaattagtgatgatgaa
gacttctttaagccaaaaggagaacatagcaagaacttaggtggtggacttgatgcggga
catgtcaactcagaggattgttccaaatttgtaaattatggaaacctgaagaattggaaa
gagaaagaagtttgtgaggacatccgtgatcgttttaccactggtgactggtcaaaagct
gctctgagaaataaaaactcagttgctggcgatgagggagaagatgatgaactttatggt
gattttgaggatctagagacaggagaaaagcataatgaccatgagaacatggagtctggt
acaaatgaagatgttgaagcagctgagcgtaggcttaaaaagctggctctccgagcaaag
tttgatgcacaaagcgataaatcggagttggaggatgaggacaatgataatggtgatggg
atcaatccccgtaatagtgaagccaaggaaccgggattcgttgacaaattgaaggaggag
cttgaaattagaaaacagatgaatttgctggaactcaatgatcttgacgaggatactcga
attgagatagaaggattccggactggaacatacttgcggctggagattcacaatgttcct
tatgagatggttgatttctttgatccgtgtcatccagttcttattggaggtattggtttc
ggtgaggatagtgctggatatatgcaggcccggttgaagaaacataggtggcacaagaaa
gtactaaagacaagagatcccattattgtatctattggatggagacgctatcagactatt
cctgtatacgccattgaagatcgcaatggcagacatcgaatgcttaagtatactccagaa
cacatgcattgccttgctatgttctggggtcctcttgtcccacccaacacaggctttgtc
gctttccaaaacttgtcaagcaatcagacaggatttaggataacagcaacctcggtcgta
cttgagtataatcaccaaacccatattgcaaagaaaatcaagctggttgggcacccgtgc
aagatcaagaagaatactgcatttataaaagacatgttcacttctgaccttgaaatagct
cgatttgaaggttcatcagtccggacagttagtggcattagaggacaagttaaaaaggct
gggaaaaacatgctcgataacaatgcccaagaagggattgcaaggtgtacctttgaagat
caaataaaaatgagcgacatagtcttcttaagggcttggaccccagtggaagttccacaa
ttttacaaccctctaactacagccttgcagccccgcgataagacctggacagggatgaaa
acgtttagggaactccgtagcgagcataacattcctattccagtgaataaggattcactc
tacaagccgatcgaaaggaagacaaagaagttcaacccattggtgattccaaagaaacta
caagcagagttaccgtttgcttccaaacccaaaaacaaaccagcgcgaaaaagaccagat
ttagatgctaggagagctgtagttatggagccggaagaaagaaaagctcatgctgtcgtc
cagcattataagctgattagtaaagtcaagacgaacaagaagaaagcaaaggagcaggag
aagaggaaagcatacgaagcagagaaggctaagaaagaggtagtatctaagaagcggaac
agagaggagagacgtgagagatatcgcacggaagacaaacagaagaagaagatgagaaga
ggccaagattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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