KEGG   Brassica napus (rape): 106401765
Entry
106401765         CDS       T04128                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
bna  Brassica napus (rape)
Pathway
bna03013  Nucleocytoplasmic transport
bna03015  mRNA surveillance pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106401765
  09122 Translation
   03013 Nucleocytoplasmic transport
    106401765
   03015 mRNA surveillance pathway
    106401765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106401765
   03041 Spliceosome [BR:bna03041]
    106401765
Enzymes [BR:bna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     106401765
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106401765
Spliceosome [BR:bna03041]
 Complex C
  Other components
   EJC/TREX
    106401765
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106401765
SSDB
Motif
Pfam: Helicase_C PP2C
Other DBs
NCBI-GeneID: 106401765
NCBI-ProteinID: XP_013697796
UniProt: A0A078J3H2
Position
C5:48438882..48440516
AA seq 228 aa
MAARRGGRELPMEDVCYYKWPLPGADKFGLFCVCDGHGGAGAANRSLDDHQYEHYIKLSE
MEKNCKLNDLLDALDFNQVVIFVKSVNRAGELNKLLIECNFPSICFHSGMSHEKRLTHYK
SFKEGHKRILVATDLVGRGIDIERVNIVINYDIPDSADTYLHRVGRAGRFGTKGLAITFV
ASGSDSEFMCMSQNFFFLRTSLRFYHWRKKNLIRLTWVLNFSNHKINY
NT seq 687 nt   +upstreamnt  +downstreamnt
atggctgcacgtcgaggaggcagggaacttccaatggaagatgtttgttattacaagtgg
ccgcttcctggggctgataagtttgggctgttttgtgtttgtgatggacatgggggagca
ggggctgcaaacagaagcttggatgatcaccaatatgagcactacatcaaactgagcgag
atggagaagaactgcaagttgaatgaccttcttgacgcattggacttcaatcaagttgtc
atatttgtgaagagcgttaacagagctggggagctgaacaagttgcttattgaatgcaat
ttcccctcaatatgttttcactctggcatgtctcatgaaaagaggctgactcactacaaa
agtttcaaggaagggcacaagaggatccttgtggcgacagacttggtaggaagaggcatt
gacattgagcgtgtcaacattgttatcaactatgacataccagattctgctgatacatat
cttcacagggtcgggagagctggtaggtttggaacaaagggtcttgcgatcacatttgtg
gcatcaggttcagattctgaattcatgtgtatgtctcagaattttttttttttaagaacc
tcactgaggttctaccattggaggaagaaaaatttaattagactaacatgggttctaaac
ttttcaaatcacaaaattaattactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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