KEGG   Brassica napus (rape): 106412203
Entry
106412203         CDS       T04128                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT4
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
bna  Brassica napus (rape)
Pathway
bna04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106412203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106412203
Enzymes [BR:bna01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106412203
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    106412203
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING zf-C3HC4_2 zf-C3HC4_3 FAIM1
Other DBs
NCBI-GeneID: 106412203
NCBI-ProteinID: XP_013708561
UniProt: A0A816TZ57
Position
C8:23428523..23430724
AA seq 321 aa
METESMDCESSTRSIPNDNETYHFSSTKKHAGAAAAVVTNIVGPTSTAAATSVYELLECP
VCTFSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY
NLGCPEIFPYYSKLNHESLCNFRPYSCPYAGSECGVVGDIPFLVSHLRDDHKVDMHAGST
FNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEEARS
YSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSSGDRKELKLRIT
GKIWKEQHSPDSGLCIPNLSS
NT seq 966 nt   +upstreamnt  +downstreamnt
atggagacggagagtatggattgcgaatcgtcgacgagaagcatccctaacgataacgaa
acttaccatttctcttccacgaagaaacacgccggagctgccgccgccgtcgttaccaat
atagtcggtccgacgtcaacggctgctgccactagcgtctacgagcttctggagtgccct
gtctgcaccttttctatgtaccctcctatccatcagtgtcataatgggcacacgttatgc
tcgacttgtaaagtgagagtgcacaaccggtgtcccacgtgtagacaagagcttggggat
ataagatgtttagctctcgagaaagtagccgagtcgcttgagctgccttgcaagtattac
aacctcggatgccctgagatttttccttactacagcaaactaaaccacgagtctctctgt
aacttcagaccgtactcttgtccttacgctggctccgagtgcggtgtcgtaggggacatc
cctttccttgtatcccatctcagggatgatcacaaagttgacatgcacgctggctccact
tttaaccaccgctacgtcaaatccaatccgcgtgaagtagagaacgctacttggatgctt
actgtgtttcaatgctttgggcaatacttctgcctccattttgaggcgttccagctcggg
atgggtcccgtgtacatggcgttcctgagattcatgggggacgaggaagaagcaaggagt
tatagctacagtttagaagtgggagggagtgggaggaagctaacgtgggaaggaacacca
agaagcatcagagatagccacaggaaagtaagagacagcaacgacggtctcatcatccaa
agaaacatggctctcttcttctccagcggtgataggaaagagcttaaacttagaatcact
ggtaaaatatggaaagagcaacacagtccagattctgggctctgcataccaaacctatct
tcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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