KEGG   Brassica napus (rape): 106418028
Entry
106418028         CDS       T04128                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
bna  Brassica napus (rape)
Pathway
bna03020  RNA polymerase
bna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106418028
  09124 Replication and repair
   03420 Nucleotide excision repair
    106418028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106418028
   03400 DNA repair and recombination proteins [BR:bna03400]
    106418028
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     106418028
  RNA polymerase III system
   RNA polymerase III
     106418028
  RNA polymerase I system
   RNA polymerase I
     106418028
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106418028
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF3557
Other DBs
NCBI-GeneID: 106418028
NCBI-ProteinID: XP_013714169
UniProt: A0A078HHR6
Position
C5:39205924..39207309
AA seq 206 aa
MGLTEEEIKRIYRIQKTLMQMLKDRGYFIADSEITMTLSQFVRKHGDNMKREDLVTLRAK
RNDSSDQLYVFFPDEVKVGINTMKVYTNRMKSENVYRAILVVQQNLTPFARNCISQISSK
FHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFG
LKRGQVVKIIRPSETAGRYVTYRYAV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgggtctaacggaagaagaaatcaaaagaatatacagaatccagaagacgttgatgcag
atgctcaaggaccgtggctactttatcgccgattctgaaatcacgatgaccctatcacag
ttcgttaggaagcatggggacaacatgaaaagggaggatcttgttactctcagagctaag
agaaacgatagcagtgatcagctctatgtcttcttccctgatgaggtgaaagttggaatt
aacacaatgaaagtgtacacaaaccggatgaagtcagagaatgtttacagagctatcttg
gttgttcagcagaacttgactccttttgctcgaaactgcattagtcagatctcttctaaa
ttccatctcgaagttttccaggaggcggaaatgctagtgaatattaaggaacatgttctt
gttcctgagcaccaagttctcaccactgaagagaagaaaactttactggagagatacact
gtcaaggagactcagcttccaaggattcaagtgactgatccaatcgcaagatactttgga
ctcaaacgtggccaagtcgtcaagatcatccgtcctagtgaaaccgctggtcgttacgtt
acctatcgttatgctgtataa

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