KEGG   Brassica napus (rape): 106424637
Entry
106424637         CDS       T04128                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bna01002]
    106424637
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:bna03110]
    106424637
Peptidases and inhibitors [BR:bna01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   106424637
Chaperones and folding catalysts [BR:bna03110]
 Other chaperones and cochaperones
  AAA proteases
   106424637
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext TIP49 IstB_IS21 AAA_16 AAA_17 AAA_5 RuvB_N AAA_28 nSTAND3 AAA_22 AAA_14 Mg_chelatase AAA_33 AAA_18 Parvo_NS1 LonB_AAA-LID DUF5906 ATPase DNTTIP1_dimer Sigma54_activat TsaE AAA_7 RNA_helicase AAA_19
Other DBs
NCBI-GeneID: 106424637
NCBI-ProteinID: XP_013720857
Position
C9:57928252..57932906
AA seq 681 aa
MKMASSTSALSLPLSNIPTCINKSQEFPKSTHLSKSSHSHNPLLKTKTPDSKLTKRALLS
LTALGLTSPLVLAHPAKAEPEAPIEAASNRMSYSRFLHHLEENEVKKVDLFENGTVAIAE
ISNPALRKIQRVRVNLPGLPVDLLRKMKEKNVDFAAHPVDVNWGAFLLNFLGNFGVPLVL
LGSLLLAFPRTPSGPNLPFGLGRSKAKFQMEPNTGITFDDVAGVDEAKQDFEEIVEFLKT
PEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRV
RDLFNKAKANSPCLVFIDEIDAVGRIRGTGLGGGNDEREQTLNQILTEMDGFAGNTGVLV
IAATNRPEILDAALVRPGRFDRQVSVGLPDIRGREEILKVYSKTKKLDKEVSLSVIAMRT
PGFSGADLANLMNEAAILAGRRGQEKITPKEIDDSIDRIAAGMEGTKMIDGKSKAIVAYH
EVGHAVCATLTEGHDPVQKVTLIPRGQARGLTWFLPGEDPTLVSKQQLFARIVGGLGGRA
AEDVIFGEPEITTGAAGDLQQITQIARQMVTMFGMSEIGPWALTDPATMQSDVVLRMLAR
SSMSEKLAKEIDQCVKKIIDNAYQIAKNHVRNNREAIDKLVDVLLDKETLTGDEFRAILS
EYTHQPLKTEDRVRIKDLISV
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgaaaatggcctcttcaacgtcagctttgtctctccctctctctaacatcccaacctgt
attaataagtcccaagagtttccaaaatcaactcatctatctaaatccagccatagtcat
aatcctcttctcaaaactaaaactccagactctaaactcaccaagagagccttgctgagc
ttaactgccttggggcttacgtcacctctagtattggctcatcccgcaaaggctgaacca
gaagctcccatcgaagctgcttccaacagaatgtcgtactcgaggtttctgcaccatctg
gaagagaatgaagtgaagaaagttgacttgttcgagaatgggactgttgccatcgcagag
atctccaatccagcgttaagaaagatccagagggttagggttaaccttccaggtttaccg
gttgatctactcaggaagatgaaggagaagaacgtagacttcgctgctcatccggtagat
gtgaactggggagctttcttgctcaacttcttggggaattttggggttcctttggtctta
cttggctctctgctattagcatttcctagaacccctagtggacccaacttgccttttggc
cttggaagaagcaaagctaagtttcagatggaaccaaacacagggataacattcgacgac
gttgcaggagtagacgaagccaagcaagacttcgaagagatagtagaattcttgaaaaca
ccagagaaattctcagccttgggtgctaaaatcccaaaaggtgtcttgttgacaggaccg
ccgggaaccggaaagactctcctggccaaggccatagccggagaagctggagttccgttc
ttctcattgtctggttcggagttcatagagatgtttgttggtgtaggagcatctagggtt
agagacttgttcaacaaggcaaaggctaactcaccctgtttagtgttcattgatgagatt
gatgctgttgggagaataaggggaaccggtttaggaggaggaaacgacgaacgtgagcag
acgctaaaccagattttaactgaaatggacgggtttgcggggaataccggagtgctcgtg
atagctgcaacgaacaggccagagattttagacgctgctttggtccgaccagggagattc
gataggcaggtttccgttggtttaccggatatcagaggaagagaggagatattaaaagtt
tacagcaaaaccaagaaacttgacaaagaagtgtctttgagcgtgatcgccatgagaact
cctggttttagtggggctgacctggcgaacctcatgaacgaagctgcgattctcgccgga
agaagaggacaagagaagattacccctaaagagattgacgactccattgatcggattgcc
gccggaatggaagggacgaagatgatcgacggtaaaagcaaagcgattgtggcgtaccat
gaagttggacatgcagtctgtgcgacattgactgagggtcacgacccggttcagaaagta
acattgattcctagaggtcaagcacgtggtctcacgtggttcttaccgggagaagacccc
acgttggtttctaaacagcagttgttcgctagaatcgtcggaggactaggaggcagagcc
gccgaggatgtaatttttggagaaccagagataaccaccggagctgcgggcgatctccag
caaataacacagatcgcaagacagatggtgacgatgtttggtatgtcggagattggtccg
tgggctctaaccgatccagcgaccatgcaaagcgacgtcgttctaaggatgctcgcgaga
agctccatgtccgagaagcttgccaaagaaatcgatcaatgcgtgaagaaaataattgat
aatgcttaccagattgccaagaaccacgtgaggaataacagagaagccatagacaagctt
gttgatgtcttgttggacaaggaaaccttaactggagacgagtttcgagcaatcctgtct
gaatacactcatcaaccgttaaaaaccgaggatagagttcgaatcaaagatttgattagt
gtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (27)   
   Pfam (27)   
All databases (38)   

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