KEGG   Brassica napus (rape): 106425334
Entry
106425334         CDS       T04128                                 
Name
(RefSeq) DNA gyrase subunit B, mitochondrial
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bna03032]
    106425334
   03400 DNA repair and recombination proteins [BR:bna03400]
    106425334
Enzymes [BR:bna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     106425334
DNA replication proteins [BR:bna03032]
 Prokaryotic type
  DNA Topoisomerases
   106425334
DNA repair and recombination proteins [BR:bna03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      106425334
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim TOPRIM_C GyrB_hook
Other DBs
NCBI-GeneID: 106425334
NCBI-ProteinID: XP_013721526
Position
C2:223995..229110
AA seq 736 aa
MGLLLRQRAPYLRLYSRLMASRPRLFSNPLSPSLHRHSSSLSSPLFSSLTPRVNVQLTKV
LSQGLIQRNAISTRSFMSSTISTEAFQESATSKGYSSEQIQVLEGLDPVRKRPGMYIGST
GTRGLHHLVYEILDNAIDEAQAGYASKVDVILHADGSVSIMDDGRGIPTDLHPVTNKSSL
ETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGVEHKQKYSRGK
PITILTRSELPLESKGTKGTSIRFWPDKEVFTTAIEFDHSTIAGRIRELAFLNPKVTISL
KREDEDPEKSQCTEYFYAGGLKEYVSWLNIDKSPIHDVLGFRKETNGASIDVALQWCSDA
YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNALAKKSKTVKEKDINLSGEHVREGLTC
IVSVKIPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLDNIVSKSLNAYKA
ALAAKRARELVRSKSVLKSSSLPGKLADCSSSNPEESEIFIVEGDSAGGSAKQGRDRRFQ
AILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKMENLRYHKIIILTDADV
DGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDADLKKITSNFPA
NASYTIQRFKGLGEMMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDARKE
LIKNAATRINLQHLDI
NT seq 2211 nt   +upstreamnt  +downstreamnt
atggggcttcttcttcgtcagagagctccttatcttcgtctctattcacgtctcatggct
tctcgtcctcgtctcttctctaacccactctctccatctctccaccgtcacagctcatct
ctctcctcgcctctgttctcctccctaactcccagggtaaatgttcaattaacgaaggtt
ttgagtcaagggctgatacaaaggaatgcaatttcaacgaggtcatttatgtcatcaacc
atatccaccgaggctttccaagagagcgccacatctaagggttacagctccgagcaaatc
caagtgctagaagggttagaccctgtcagaaaacgaccagggatgtatataggaagcact
ggaactcgtggtctgcaccatctggtttatgagatactagataacgcaattgatgaggct
caagctggttatgcttcaaaggttgatgttattctacatgcggatggttcagttagtatt
atggacgatgggcgtgggatacccactgatctgcatccggtaactaataaatcttccctg
gagactgtgcttacggtgttacacgcaggtggcaagtttggtgggacaagtagtggttac
agtgtgtctggtgggttgcacggtgtggggttatctgttgtcaatgctttgtctgaggca
ctagaggtcacggtttggagagatggtgtggagcataagcagaagtattctcgtggaaag
cccataactatactcacacgcagtgagctgccgctagagtcaaaggggaccaaagggaca
agcatcaggttttggcctgacaaagaagtattcacaacggctattgaatttgaccatagc
actattgctggaagaataagggagcttgcatttctgaatccaaaggttaccatttctctt
aaaagggaggatgaagatcctgagaagagccaatgtactgaatatttctacgctggtggc
ttaaaggaatatgttagctggctaaacattgataagagtccgattcatgacgtgctaggc
ttcaggaaggagactaacggtgcctccattgacgttgccctgcaatggtgctcagatgcg
tattcagacacgatgctgggatacgccaatagcattcgcactattgatggtgggacacac
atcgaaggtgtgaaagcctcactaacaaggacccttaatgcccttgcaaaaaagtcaaaa
actgtaaaggagaaggatattaacttaagtggggaacatgtcagagagggattgacctgt
attgtctcggtcaagattcctaatcctgagtttgaaggtcaaacaaagacaagattagga
aatccagaggtgagaaaaattgtggaccaatcagtgcaggagtatctcacggagtatctg
gaactgcatccagatgtacttgacaacattgtttccaaatcccttaacgcttacaaggct
gctttggctgccaagagggcaagggagctggttagatcaaaaagcgttttgaagtcgtca
tcacttcctgggaaactggctgattgctcatcatcaaatcctgaagaatctgagattttc
atcgttgaaggagattctgctggtggcagtgcaaagcagggccgtgacagacgttttcag
gcaatacttccattgagaggtaaaattctgaacattgaaagaaaggatgaagcggccatg
tataagaatgaagagattcagaatcttattcttggccttggacttggagtaaagggagaa
gatttcaagatggagaatctgcggtaccacaagattatcatcttaacagatgcagatgtt
gatggtgcacatatccgcacacttctgttaacctttttcttcagatatcagagagccttg
tttgacgccggttgcatctatgttggagttccaccccttttcaaggttgagagggggaaa
caagcgcactattgctatgatgatgcagatctcaaaaagattacctctaacttccctgca
aatgcatcttacaccattcaaaggttcaaaggtctgggagagatgatgcctgagcagctt
tgggaaacaacaatgaatccagaaacaaggattctgaagcaactagttgtcgatgacata
gcagaagctaacatgacattctcctctcttatgggtgctcgggtcgatgcccggaaagaa
ctcattaaaaatgcagcaaccaggatcaatctgcagcatctcgacatataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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