KEGG   Brassica napus (rape): 106428211
Entry
106428211         CDS       T04128                                 
Name
(RefSeq) rhamnogalacturonate lyase-like
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    106428211
Enzymes [BR:bna01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     106428211
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg RhgB_N Y_Y_Y
Other DBs
NCBI-GeneID: 106428211
NCBI-ProteinID: XP_048591520
Position
A7:18069589..18074776
AA seq 686 aa
MAKKLIALAFTLIILFAIHNNSRFFVLIFLLPGVHSRTSRNKLGIAKPEQKLASGRLTLK
KVGPNQVVVDNGIIQVTFSSPQGLITGIKYKGFDNVLNNKIKNRGYWDVMWYEPGQEQLI
DLLEGVKFNVINQTSEHVEISFSRAWKISQRGSLVPLNVDKRYIIRRGVSGIYMYAVLEK
LKGWPTVDMDQTRIVFKLNTKFDFMAISDQRQKIMPSEIDRDITNKRANPLAYKEAVRFV
NPQNRIFKGQVDDKYMYSMENKDNKVHGWISSDQRVGFWMITPSDEFRVCGPLKQELTSH
VGPTTLSMFTSLHYAGKDMNTTYTSMEPWKKVYGPVFVYLNSASSTNLLWTDAKRQMVEE
VHSWPYDFVKSVDYPLHQQRGTVKGQFFVMDRYISNKSKLFGKFAFVGLAVPGEAGSWQT
ENKGYQFWTTADRMGIFTITNVRPGSYNLYAWVSGHIGDYKYERDITITPGREIDVGAIL
YEPPRIGATLWEIGKPDRTAAEFYIPDPDPILSTKLYLNNSYQPQDRFRQYGLWDRYTAL
YPRNDLVYIVGVSDYKKDWFYAHVTRNAGNGTYQATTWQIVFSLKAVIKTGNYTFRMALA
AATTANLSVRINEPKSKPIFLIGLIGQDNAIARHGIHGLYNLYDINVGGNLLRVGNNTIF
LTQDRRWGSFTGVMYDYLRLESPPEV
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggcaaagaaactaatagctctcgcattcactcttataattctcttcgctattcataat
aactcgcgtttttttgttctaattttccttcttccaggtgttcattcccgaacgtcaaga
aacaagttaggcatcgcaaagccggaacagaagctcgcatctggccggcttacgcttaaa
aaagttggtcctaaccaagtggtcgttgataacggtatcatccaagttaccttctcaagt
ccacaaggtttaataactggaatcaagtacaagggctttgacaatgtgttgaacaacaaa
attaaaaatcgtgggtattgggacgtaatgtggtatgaaccaggacaagaacaactaatc
gatcttttagaaggagtaaaattcaacgtcataaatcaaacaagtgagcatgtcgagatt
tcattttcacgagcttggaagatttctcaacgtggctcactggtcccgttaaatgtagac
aaacgatatatcattcgaagaggggtatctggaatatacatgtacgctgtgttagagaag
ttaaaaggctggccaactgtggacatggaccaaacaaggatcgtcttcaagcttaacaca
aaatttgattttatggctatatctgatcaacggcaaaaaattatgccttctgaaatcgac
cgagatattactaataagcgtgctaatccattagcttataaagaagctgttcgttttgta
aatccccaaaatcgtatatttaaagggcaggttgacgataagtatatgtattcgatggaa
aacaaagacaacaaagtacatggctggatctcgtccgaccaacgtgtcggcttctggatg
attactcccagcgatgagttccgtgtctgtgggcccctcaaacaagaactaacttctcat
gttggacccaccacactctccatgtttacaagtttacattacgcggggaaagatatgaac
acaacttatacaagcatggagccgtggaagaaggtgtatggtcctgtctttgtttatctc
aactctgcctcctctactaatcttctctggaccgatgctaaacgacagatggttgaggag
gtccatagttggccatatgatttcgtgaagtcagttgattaccctcttcatcaacaaaga
gggacggtcaaaggtcaattctttgtaatggacagatacataagcaacaagtcgaagtta
tttgggaaatttgcttttgtgggtttagcagtgcccggtgaagctggttcatggcaaacc
gaaaacaagggatatcaattttggacaacagcagacagaatggggatattcacaataacg
aatgtgagaccagggagttataatctctatgcatgggtttctggacatattggtgactat
aaatacgagcgtgacattaccatcacaccaggcagggagatagacgtaggagccatactg
tatgaaccgcccagaatcggcgctacactgtgggaaatcggaaaaccagaccggactgct
gcagagttctatatcccagatccggacccaatcctttcgaccaaactctatcttaataac
tcttatcaacctcaagaccgatttagacaatatggtctatgggatcggtacactgctttg
tatcctcgaaatgatcttgtttatattgttggagtaagtgattataaaaaagactggttc
tatgcacatgtgaccagaaatgctggaaatgggacatatcaagcaacgacatggcaaatt
gtgtttagtttgaaagcagtgattaaaactggaaactacacgtttcgaatggctttggct
gcagccacgactgcaaatttatctgttcggatcaacgagcctaagtccaaacctattttc
ttgattgggctaataggtcaagataacgcgatcgctagacatgggattcatgggttatac
aacttgtatgatatcaatgttggtggaaacttacttagggttggtaataatacgattttt
ctcactcaagatcggagatggggttcgtttacaggtgttatgtatgattatctacgtctg
gaaagtcctccggaagtttga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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