KEGG   Brassica napus (rape): 106430357
Entry
106430357         CDS       T04128                                 
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
  KO
K08740  DNA mismatch repair protein MSH4
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106430357
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    106430357
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV
Other DBs
NCBI-GeneID: 106430357
NCBI-ProteinID: XP_048622120
Position
C8:20950219..20955982
AA seq 795 aa
MEDDGGERSSFVAGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPC
VIIVPPNKLAADGMVGVSELVDRCYSTVRKVVFARGCFDDTKGAVLIQNLAAEEPLALGL
DTYYKQHYLSLAAAAATIKWIEAEKGVIVTNHSLTVTFNGSFSHMNIDATSVENLEIIDP
FHNSLLGTNNKKRSLFQMFKTTKTVGGTRLLRANLLQPLKDIKTINTRLDCLDEMMSNEE
LFYGLSQVLRKFPKETGKQNRVLCHFCFKPKKVTEAVLGFDNTRRSQNMISSIILLKTAL
DALPLLAMALKDAKCFLLANIYKTVCENDRYASIRKRVGEVIDDDVLHARVPFVARSQQC
FALKAGIDGFLDMARRTFCDTSEVIHNLASKYREEFNLPNLKLPFNNRQGFFFRISQKEV
QEKLPSKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFVRTEICLEALMDAIREDVSA
LTLLAEVLCLLDMIVNSFAHSISTKPVDRYSRPELTDSGPLAIDAGRHPILESIHNDFVP
NSIFMSEASNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATMRVVDRIFTRMG
TMDNLESNSSTFMTEMRETAFIMQNVSNRSLIVMDELGRATSSSDGLAMAWSCCEHLLSL
KAYTVFATHMDSLAELATIYPNVKVLHFHVDIRDNRLDFKFQLRDGTLHVPHYGLLLAEV
AGLPNTVIETARTITSRITDKEMKRIELNCEKHHEMHQIYRVAQKLICLRYSKQNEDSIR
QALQNLKDSFIEGRL
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggaagacgacggtggagagagatcgagcttcgtcgctggactaatcgagaacagagcc
aaagaggttggaatggctgcgtttgatttaagatccgcttcactgcatctatctcagtat
atagagacgagcagctcgtatcaaaacacgaagacgctgctgcgtttctatgatccttgt
gtgattattgttcctcccaacaaacttgccgccgatggcatggttggggtttcagaattg
gtggatagatgttacagcaccgtcaggaaggttgtgtttgctcgtggctgtttcgatgac
accaagggtgccgtgctaatacaaaacttggctgcagaggaacctttggctcttggttta
gacacttactataagcagcattatctatcactagctgctgctgctgctacaatcaaatgg
atagaggcggaaaagggtgtgattgtcaccaaccactcactcactgtaacctttaatgga
tcctttagtcacatgaatatcgatgcaactagtgttgagaatctggaaatcattgatccg
ttccataattctcttttgggcactaacaataagaagaggagtctgttccagatgttcaag
acaacaaaaacagttggcgggactaggcttcttcgtgccaatttgttgcagcccctgaaa
gatattaaaactatcaacactcgcctggactgcttggatgagatgatgagcaatgaagaa
ctattctatgggctttcacaggttttacgtaaatttccaaaagagactggtaagcaaaat
cgtgttctttgtcatttctgcttcaagccaaagaaagtcacagaagcagtcctaggtttt
gataataccagaaggagccaaaacatgatttcaagcattattttacttaagacagccttg
gatgctctgcctctactagctatggctctaaaggatgcaaagtgttttctccttgctaat
atttacaagactgtgtgtgaaaatgatagatatgcttccatcagaaaaagagtcggggaa
gtgattgatgatgatgttcttcatgcacgagttccttttgttgcccgctcacagcagtgt
tttgcattaaaagctggtattgatggatttttggatatggcaaggagaaccttctgtgat
actagtgaagtgatacataatctggccagcaagtatcgtgaggaattcaacttgccaaat
ctaaaactcccattcaacaacagacagggcttcttttttagaatttcgcagaaggaagtt
caggaaaaacttccaagcaaatttactcaggttgtaaaacatgggaaaaacattcattgt
tcaagtctggaacttgcctctttgaatgtcaggaataagtctgccgctggagagtgtttc
gttcgaacggaaatatgcctggaagcacttatggatgctataagggaagatgtctctgcc
ctcaccctcctagcagaagttttatgtctcctagatatgattgttaattcatttgctcat
tcaatatccacaaagccagttgatcgatactccagacctgaactaacagatagtggccca
ctggcaattgacgctggaaggcatccaatcctagaaagcatacacaatgactttgttcct
aatagtatcttcatgtcagaagcaagcaacatgttggtagttatgggtccaaacatgagc
ggaaagagcacctatctccaacaggtgtgtctagtagtcattcttgctcagattggctgc
tatgtcccagctcgctttgccactatgcgtgtggttgaccgcatattcacaagaatgggg
acaatggataaccttgagtcaaattcaagcacgtttatgacagagatgagggagaccgct
ttcataatgcagaatgtctccaacaggagtttgatagtaatggacgaactcgggagggct
acttcttcctcggacgggttagcaatggcatggagctgctgcgagcatctcttatcgctc
aaagcgtacacagtatttgcaacccatatggacagcctggcggagttggcaaccatctac
ccgaatgtcaaggttcttcacttccatgtagacatcagagacaatcgcttagacttcaag
tttcaactacgagatggaacattacatgttcctcactacggccttctgttagccgaagtg
gctggtctgcctaatacagtaatcgaaacagctaggaccataacctcaaggatcacagac
aaggaaatgaaaagaatagagctaaactgtgagaagcaccatgaaatgcatcagatttac
agagtcgctcaaaagttgatatgcttgaggtactccaaacaaaacgaagactcaatccgt
caagctcttcagaatttaaaggacagcttcattgaaggaaggctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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