KEGG   Brassica napus (rape): 106431654
Entry
106431654         CDS       T04128                                 
Name
(RefSeq) WD repeat-containing protein ATCSA-1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
bna  Brassica napus (rape)
Pathway
bna03420  Nucleotide excision repair
bna04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106431654
  09124 Replication and repair
   03420 Nucleotide excision repair
    106431654
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106431654
   03400 DNA repair and recombination proteins [BR:bna03400]
    106431654
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106431654
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      106431654
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 106431654
NCBI-ProteinID: XP_013727914
UniProt: A0A816KM58
Position
C5:complement(18933529..18936110)
AA seq 450 aa
MWQAIQARETGRTPCNSFANQLKSRRISSLQLCNRKDFVSPHRGAVNSLQVDLTEGRYLL
SGASDGSAAVFDTQRATDSEASGLIEKHKCVFSVDKGHEHGHRFAVSSAVWYPIDTGLFV
TGSFDHLIKVWDTNTAQAVVDFKMPGKVYRTAMSSLAMSHTLIAAGTEDVQVRLCDIASG
AFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSVTQLGVRP
PILKHSAVSTKVSAEKSSSGAKNRLKTLHSKHTGSQNMKGSSSARPSVEKARQKRLHPGM
LSTLDRATAHYGVVTGLKATNDGMYLLSAGSDSRIRLWDTQSGCNTLLNFETGRLQTSKA
IQMATSDDPALVFVPCMKTVKAFGMWSGRTTLMFRGHYESVNTCCFNSTDQELYTSGADR
QILVWSPGGSVEGEMDQDEEAAEDKDNWSD
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgtggcaagccatccaagccagagaaaccggtcggaccccttgcaattcgttcgcgaac
caactcaaatcacgccgcatctcctctctccaactctgtaatcgcaaagatttcgtttct
cctcaccgtggcgccgtcaactcccttcaggttgatttgacggaagggaggtacttgctc
tcaggagcatcagatggttcagctgccgtgttcgatactcagcgcgcgactgattccgag
gcaagtggtctaattgagaagcacaagtgtgtatttagtgtggacaaggggcatgaacat
gggcatagatttgccgtttcttctgctgtttggtatcccattgacactgggctcttcgtt
acaggttcttttgatcatctcatcaaagtctgggataccaatactgctcaggcggttgtg
gattttaagatgcctgggaaggtttatagaactgccatgtcttctttggctatgtctcac
acccttattgctgctggcactgaggatgtgcaggttcgcctctgtgatatagcttctgga
gctttctctcacaccctatctggtcaccgtgatggtgttatgtcggtggaatggtctact
tccagcgagtgggttttgtacactgggggatgtgatggtgctatacgcttctgggacatt
agacgtgctggttgtttccgtgttttggatcaatcagttacacaacttggggttcgtcca
ccgattttaaagcattcagcggttagcactaaggtttcagctgaaaaatcttcttctggg
gccaaaaataggttgaagacactgcatagtaaacacacggggagccagaatatgaaggga
tcatctagcgctagaccttcagtggaaaaggctagacagaagagacttcatcctggaatg
ttgtctactctagatcgtgctacggctcattatggtgttgttactggattaaaggcaact
aacgatgggatgtaccttcttagtgctgggtcggattcaagaataaggctgtgggatact
caatccggatgcaatacacttttgaactttgaaactggacgccttcagaccagcaaagcg
attcagatggctacaagtgatgatccagctcttgtatttgttccatgcatgaagactgtg
aaggcttttggcatgtggtcgggtagaacaacactgatgtttcgtggacactacgaaagc
gtgaacacttgctgctttaattccactgatcaggaactatacacaagtggtgcagataga
caaatactcgtgtggtcaccaggtggatccgtcgaaggagaaatggaccaagatgaagaa
gctgccgaagataaagacaattggagtgactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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