KEGG   Brassica napus (rape): 106436527
Entry
106436527         CDS       T04128                                 
Name
(RefSeq) serine hydroxymethyltransferase 1, mitochondrial-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bna  Brassica napus (rape)
Pathway
bna00260  Glycine, serine and threonine metabolism
bna00460  Cyanoamino acid metabolism
bna00630  Glyoxylate and dicarboxylate metabolism
bna00670  One carbon pool by folate
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
bna01200  Carbon metabolism
bna01230  Biosynthesis of amino acids
bna01240  Biosynthesis of cofactors
Module
bna_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    106436527
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    106436527
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    106436527
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    106436527
Enzymes [BR:bna01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     106436527
SSDB
Motif
Pfam: SHMT
Other DBs
NCBI-GeneID: 106436527
NCBI-ProteinID: XP_048633843
Position
A1:610954..620431
AA seq 517 aa
MAMAMALRRLSSSVDKPIRPLIRSSSCYMSSLPSEAVDDKERSRVTWPKQLNASLEEVDP
EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEFIDM
AETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSH
GYQTDTKKISAVSIFFETMPYRLDESTGFIDYDQMEKSATLFRPKLIVAGASAYARLYDY
ARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRK
GVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVL
SNSAKFAQTLMEKGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGD
VSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVKLALKVKSEAQGTKLKDFVSAME
SSSAIQSEIAKLRHDVEEFAKQFPTIGFEKETMKYKN
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcgatggctatggctcttcggaggctttcttcttcagttgacaaacctattcgtcct
cttatcagatcatcttcatgctacatgtcttctttaccaagtgaagctgttgatgacaag
gagaggtctcgtgtcacttggccaaaacagcttaacgcatctttggaggaagttgatcct
gagattgctgacatcattgagcatgagaaagctagacaatggaagggacttgaactcatt
ccgtctgagaatttcacatctgtctcggtgatgcaagctgttggctctgtgatgactaac
aagtacagtgaagggtaccctggtgctagatactatggaggaaatgagttcatagacatg
gcggaaaccttgtgccagaagcgtgctcttgaagctttccggttagaccctgagaagtgg
ggagtgaatgtgcaacctttgtctggatcacctgccaacttccatgtgtacactgcattg
ttgaagcctcatgagagaatcatggcacttgatcttcctcatggtggtcatctttctcat
ggttaccagactgataccaagaagatatctgctgtgtctatcttttttgaaactatgccc
taccgcttggacgagagcactggctttatcgactacgaccagatggagaagagtgctact
cttttcaggccaaaactgattgttgctggtgcaagtgcttatgctcgattgtatgactat
gcccgcatccgcaaggtgtgcaacaagcaaaaagctgtgatgctagcagatatggcacac
ataagcggtttggtagcagctggtgtaatcccttcaccgttcgagtatgcagatgttgta
accaccacaactcacaagtccctacgtggacctcgcggagccatgattttctacagaaag
ggtgttaaggaaattaacaaacaaggcaaagaggttttgtatgattttgaagacaagatc
aatcaagctgtcttccctggtcttcaaggcggtccacataaccacactattacaggacta
gctgttgctttaaagcaggcaactacttcagagtacaaagcataccaagagcaagtcctc
agtaactctgcaaagtttgctcagactctgatggagaaaggttatgaacttgtttctggt
ggaactgacaaccatctggttctagtgaacctgaagcccaagggaattgatggatctaga
gttgagaaagtgttggaagctgttcacattgcatccaacaaaaacactgttcctggagat
gtttctgccatggttcctggtggaatcagaatgggtacacctgctctcacttccagaggt
tttgttgaggaagactttgccaaagtagctgaatactttgacaaagctgtgaagttggct
ctcaaagtcaaatccgaagctcaaggaaccaagctgaaagattttgtgtcagcaatggaa
tcatcttcagccattcaatcagagattgccaagctgcgccacgacgtggaggagttcgct
aagcagttcccaactattgggtttgagaaagaaaccatgaagtacaagaactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (9)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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