KEGG   Brassica napus (rape): 106437740
Entry
106437740         CDS       T04128                                 
Name
(RefSeq) endonuclease III homolog 1, chloroplastic-like isoform X1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
bna  Brassica napus (rape)
Pathway
bna03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106437740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    106437740
Enzymes [BR:bna01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     106437740
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     106437740
 Prokaryotic type
     106437740
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 EndIII_4Fe-2S HHH_8
Other DBs
NCBI-GeneID: 106437740
NCBI-ProteinID: XP_013734146
Position
A3:complement(7541405..7544332)
AA seq 388 aa
MILVNRAVSTTLDNVAWFSRIRTMNRKIHSTLSSSKPDSLRIQHLRSEDSNPESASGASG
SSETLVYTRKKRLKQEALEPLEKKSQLCGLPDIEEFAFKKNTRSSKRSTETNITVASAST
AGRSTETNITVASAKTTAGNPPENWVEVLEGIRQMRSSGDAPVDSMGCDKAGSFLPPSER
RFAVLLGSLLSSQTKDQVNNAAIHRLHQKGLLTPEAIDKADESTIKELIYPVGFYARKAT
YMKKIAKICLEKYNGDIPSSLDDLLALPGIGPKMAHLILHIAWNDVQGICVDTHVHRICN
RLGWVSRPATKQKTSSPEETRVALQQWLPKEEWVAINPLLVGFGQTICTPLRPRCEACSV
AKLCPAAFKEASSSPSSKLKKSKQSKEL
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgattctcgttaacagagccgtttctacaacccttgacaacgtcgcttggttttctcga
atccgaaccatgaatcgcaaaattcactccactctctcttcttctaaacccgactctctg
agaatccaacatcttcgctcggaagattcgaacccagaatcagccagtggagcttctgga
tcatcggagactctggtatacacccgtaagaaaaggcttaaacaggaagctttggagcct
ctggagaaaaaatcacagctttgtggattgcctgatatagaagaatttgctttcaaaaag
aatactagatcttcgaagaggtcaacggaaactaacatcactgtggcttcagccagcaca
gcagggaggtcaacggaaactaacatcactgtggcttcagccaaaacaacagctggaaac
ccgcctgaaaactgggtagaagtgctcgagggcattcgtcaaatgagatcatctggagat
gcgccagttgattctatgggatgtgataaagctggtagctttctacctccttcggaaaga
agatttgctgtcttgctaggatcacttctttcaagtcagacaaaagatcaagttaataat
gctgcaatacatcgtcttcatcagaagggccttctcactcccgaagccattgacaaggct
gatgaatcaaccataaaagaactgatttatccggttggcttttatgcaagaaaggctaca
tatatgaagaaaatagctaaaatctgtttggagaaatataacggagacattccaagctct
ttggacgatctacttgcgcttccggggattggtcccaagatggcacatttgattctgcat
atagcatggaatgatgttcaaggtatctgtgtagatactcatgtccatcgcatttgcaat
cgacttggttgggtttctcggccagcaaccaaacagaaaacttcgtctccagaggaaaca
agagtagctttgcaacaatggcttccaaaggaagaatgggttgccattaacccgcttctg
gtgggatttggacaaacgatttgcacaccgctgagacctcgttgcgaagcctgcagtgtt
gctaagctttgtcctgctgctttcaaagaggcttcatcaagtccatcatccaagttgaag
aaatctaagcaaagcaaagaactatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system