KEGG   Brassica napus (rape): 106437789
Entry
106437789         CDS       T04128                                 
Name
(RefSeq) chaperonin CPN60, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
bna  Brassica napus (rape)
Pathway
bna03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106437789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106437789
   03110 Chaperones and folding catalysts [BR:bna03110]
    106437789
   03029 Mitochondrial biogenesis [BR:bna03029]
    106437789
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bna04147]
    106437789
Enzymes [BR:bna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     106437789
Messenger RNA biogenesis [BR:bna03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     106437789
Chaperones and folding catalysts [BR:bna03110]
 Heat shock proteins
  HSP60 / Chaperonin
   106437789
Mitochondrial biogenesis [BR:bna03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    106437789
Exosome [BR:bna04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106437789
  Exosomal proteins of other body fluids (saliva and urine)
   106437789
  Exosomal proteins of breast cancer cells
   106437789
  Exosomal proteins of colorectal cancer cells
   106437789
  Exosomal proteins of bladder cancer cells
   106437789
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 106437789
NCBI-ProteinID: NP_001302985
UniProt: P35480
Position
A3:complement(8016101..8019384)
AA seq 587 aa
MYRLISSIASKARVARNCTSQIGSRLSSTRNYAAKDIRFGVEGRALMLRGVEELADAVKV
TIPPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANRPTQLNRCLG
DGTTCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTKLKSRARMISTSEEIAQ
VGTISANGDRELVTDCKAMESVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITN
QKNQKCELEDPLILIHEKKISNLNSMVKVLELALKSQRSLLIVAADLESDALAVLILNKL
RAGIKVCAVKAPGFGENRKANMHDLATLTGAQVITEELGMNLEKIDLSMLGNCKKITVSK
DDTVFLGWGAGDKKAIGERCEQIRSMVEASESDYDKEKLQERLAKLSGGVAVLKIGGASE
SEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTANFDHKIGVQIIQNA
LKTPVYTIASNAGVEGAVIVGKLLESDNPDLGYDAAKGEYVDMVKSGIIDPVKVIRTALV
DAASVSSLLTTTEAVVTEIPTKEDASPAMGGGGGGMGGMGGMGGMGF
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgtatcgtcttatctccagcattgcttcaaaagctagagttgccagaaactgtacatcc
cagattggaagcagactcagttccactaggaattatgcagccaaagacataaggttcggt
gttgagggtcgtgctttgatgcttagaggtgtcgaggagcttgctgatgctgttaaagtc
accatcccaccaaagggtcgtaatgtcatcatcgaacaaagctggggtgcacctaaggtg
acaaaggatggtgtaactgttgccaagagcattgagttcaaggacagagtcaagaacgtt
ggtgccagtcttgtcaaacaggttgctaaccgcccaacccaattgaaccgttgccttggt
gatggaacaacgtgtgctacggttcttactagagctatcttcacggaaggctgtaaatca
gtcgctgctggaatgaatgcaatggacttaagacgtggtatcaaactggctgttgacacc
gttgtgacgaagttgaagagccgagcacgcatgattagcacttctgaggaaattgctcaa
gttggaaccatatcagctaatggagatagagaattggtgactgattgcaaggctatggag
agtgttggcaaagagggagtcatcacaatccaagatggcaagaccttgtttaacgagctt
gaagttgttgagggtatgaagattgacaggggatacatctccccatacttcattacaaac
cagaagaaccaaaaatgtgaactagaagatcctctcattctaatccacgagaagaaaatc
tccaatttaaattctatggtgaaagtcttagaacttgccctcaagagtcaaaggtcgctg
ttgatcgttgcggcggatttggagagtgatgctcttgccgtgctaattctaaacaagctc
cgtgctggaattaaggtctgtgctgtgaaggctcctggttttggagaaaaccgtaaggca
aacatgcacgatctagctaccctcaccggagcccaggtaataacagaagagttgggtatg
aatcttgagaaaattgacctcagtatgcttggaaactgcaaaaagataactgtatccaaa
gacgacactgttttccttggatggggggctggtgacaagaaagcaattggggagcgatgt
gaacagatacgatccatggttgaagcgagcgagtctgactatgacaaggagaagctacaa
gaaaggttggctaagctttctggtggtgttgctgtactaaagattggaggtgcgagcgag
tcagaagttggagaaaagaaagatcgagtgaccgatgctctaaatgccaccaaagcagct
gttgaagagggtattgttccaggtggtggtgttgctcttttgtacgcgtcaaaagaactt
gacaagctttcaacagctaactttgatcacaaaatcggtgtccaaatcatccagaacgct
ctcaagacacctgtttacaccattgcttccaacgctggagtcgagggtgcagtcattgta
ggcaagcttttggaatcagataatcctgacctcggttatgatgctgctaaaggagaatac
gttgatatggtgaagtctggtattatcgaccctgtgaaagtgatcagaaccgcattggtt
gatgctgcaagtgtctcgtctttgttgacaacaacggaagcagttgtgactgagattcca
actaaagaggatgcgtctccagctatgggcggtggtggcggcggcatgggtggtatgggc
ggtatgggaggaatgggtttctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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