KEGG   Brassica napus (rape): 106437947
Entry
106437947         CDS       T04128                                 
Name
(RefSeq) DNA-binding protein SMUBP-2-like
Organism
bna  Brassica napus (rape)
SSDB
Motif
Pfam: AAA_11 AAA_12 SMUBP-2_HCS1_1B AAA_30 AAA_19 Viral_helicase1 DEAD UvrD-helicase nSTAND3 AAA_22 AAA_25 AAA_16 AAA RuvB_N PIF1 ResIII AAA_33 PhoH T2SSE DUF2786 Zot AAA_7 IstB_IS21 SRP54 UvrD_C_2 ATPase AAA_5 TsaE
Other DBs
NCBI-GeneID: 106437947
NCBI-ProteinID: XP_013734426
Position
A9:15907442..15909861
AA seq 643 aa
MAKNRGTAMSLESFVSTMAPLIDMEKEAEISMSLTSGASRNIETAQKKGTTILNLKCVDM
QTGLMGKSLLEFQSNKGDVLPPHKFGNHDVVVLKLNKADLGSSPLAQGVVYRLRDSSITV
VFDEVPEEGLNTSLRLEKLANEVTYRRMKDTLVQLSKGVLRGPASDLVPVLFGERGPTVA
KKEVEFTAFNKSLDQSQRDAISKALSSKDVFLLHGPPGTGKTTTVVEIILQEVKRGSKIL
ACAASNIAVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSALANDIRKE
MKALNGKLLKAKDRNTRRGIQKDLRALGKEERKRQQLAVSDVIKNTDVILTTLTGALTRK
LDSITFDLVIIDEGAQALEVACWIALLKGSRCILAGDHLQLPPTIQSAEAERKGLGITLF
ERLADLYGDEIKSMLTVQYRMHELIMNWSSEELYDGKITAHSSVASHMVFDLDDVEKSSA
TEATLLLVDSAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLIKSGVRPSDIGIITPYAAQ
VMVLRILRGKEEKLKEMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVT
RARRQCCVVCDTETVSSDAFLKRMIEYFEEHGEYLSASDYTNW
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggccaagaaccgaggaactgcgatgtcactcgagtccttcgtgtcaacgatggctcca
cttatcgacatggagaaagaagccgagatctcaatgtccctaacctcaggcgcgtcgaga
aacatcgaaaccgctcagaagaaaggcaccacgatcctcaacttgaaatgcgtcgatatg
caaacaggtctcatggggaagtctctcctcgagttccaatccaacaaaggagacgtcctt
cctccccacaagttcggcaaccacgacgtcgtcgttttaaagctcaacaaagccgatctc
ggctcctctccccttgcgcagggagtcgtgtaccggttgagagactcctcgatcacggtt
gtgttcgatgaggtccctgaggaagggctgaacacttctctgaggctggagaagctcgct
aacgaggtgacgtataggaggatgaaggatacgttggtgcagttgagtaaaggtgtgttg
agaggacctgcttctgatttggtacctgtcttgttcggtgagagagggccaacggttgca
aagaaggaggttgagtttacggcgtttaacaagagtcttgatcagtctcagagagatgcg
atttcgaaggctttgtcttcgaaggatgtgtttttgttacacggtcctcctggtactggg
aagacaactactgttgtggagataatcttgcaagaagtgaaacgcggttccaagattctc
gcgtgtgcggcttcgaatatcgctgttgataacattgtcgagaggcttgttcctcacaag
gtgaagctggtgagagtggggcatcctgcgaggctcttacctcaagtgctggatagtgct
ctagacgctcaggttcttaagggggataacagcgcgctagcgaatgacatcaggaaggag
atgaaggcgttgaacgggaagctgttgaaagcgaaagatagaaacacgaggagagggata
cagaaggaccttcgagctttgggtaaagaggagcgtaagaggcagcagttagctgtttcg
gacgtgatcaagaacactgatgtcattctcacgactctgactggtgcactaacgcgaaag
cttgatagtataacttttgacttggtgattatcgatgaaggagcgcaggctcttgaggtt
gcttgctggattgctctgcttaagggttcgagatgtatacttgcgggagaccatctccag
ctcccgccgacgatccagagcgctgaagctgagaggaaagggttggggataacgctcttt
gaacggttagcggatctttatggagatgagattaagtctatgcttactgttcagtaccgt
atgcatgagcttattatgaactggtcatcagaagagctttacgatgggaagataacagcg
cattcaagtgttgcctcgcatatggtttttgacttggatgatgtagagaaatcttctgca
acagaggcgactctgctgttagtagattccgctgggtgtgacatggaggagaagaaagac
gaggaagagagcacttataacgaaggggaagcagaggttgctatggcgcatgccaagaga
ctgatcaagagtggtgttcgtccttctgatattggaatcatcacaccttacgctgctcag
gttatggtgcttaggattcttaggggcaaagaggagaagctaaaggagatggagatctct
acggtggatggtttccaaggacgagagaaagaagctatcatcatttcaatggttagatca
aactcaaagaaggaggttgggtttctaaaggaccaaaggagaatgaacgtggctgttact
cgcgctagaagacagtgttgtgtggtctgcgatacagagacggtgagcagtgatgcgttt
ctcaaacgtatgattgagtactttgaggagcatggggaatatctcagcgcctctgactac
accaattggtaa

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