KEGG   Brassica napus (rape): 106446239
Entry
106446239         CDS       T04128                                 
Name
(RefSeq) pre-mRNA-splicing factor SLU7
  KO
K12819  pre-mRNA-processing factor SLU7
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106446239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106446239
Spliceosome [BR:bna03041]
 Complex C
  Other components
   Step II factors
    106446239
SSDB
Motif
Pfam: Slu7 BLOC1S3 Tudor_3 zf-CCHC_4
Other DBs
NCBI-GeneID: 106446239
NCBI-ProteinID: XP_048602120
Position
C1:complement(36465447..36474620)
AA seq 541 aa
MATASVGFKSREEHRKQQELEEARKAGLAPAEMDEDGKEINPHIPQYMSSAPWYLNADKP
SLKHQRKWKVDPNYTKSWYDRGAKTFQADKYRKGACENCGAMTHKTKLCTERPRKIGAKW
TNKNIAPDENIETFDLDYDGKRDRWNGYDTAKYAEVIKRYEARDEARRNFLKEQQLKKLE
KKRNKKVDEEESSDADEEEEEDALKHDEAKADESKQMDFSKVEKRVRTTGGGSTGTVRNL
RIREDTAKYLLNLDVNSACYDPKTRSMREDPLPNADPNEKFYAGDNQYRMSREALEFKNL
NIHALQLSEKGQEEVIMQAAPSQAELLFKKYKEAKEKLKKQIQETIMEKYGNAAASVEEI
PKELLFGQSEREVEYDRCGRVIKGMELSVPKSKYEEDVYINNHTSVWGSWWKDQQWGYKC
CQQTIKNSYCTGVAGIEAAEEAADLMRTNIERHAAASNDRSGPVEEKRFVTWGSDTPEDL
VLDREKLAEALKKEDERKKEEKDERKRKYNVQWNDQITPEEMEAYRMKRIHEDDPMKNLL
H
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggctactgcatcagttgggtttaagtctagagaagagcaccgtaagcagcaagaattg
gaagaagcgcgtaaagcagggctagctccggcagagatggatgaggacggaaaagagatt
aaccctcacattcctcaatacatgtcttctgctccttggtacctcaatgcagacaagcct
agcttaaaacatcaaaggaaatggaaagttgatccaaactatacaaagtcgtggtacgat
agaggagccaaaacgttccaggcagataagtacaggaaaggagcttgtgagaactgtggg
gctatgacgcataagacaaagttgtgcacagagaggccaagaaagataggagcaaagtgg
acaaataagaacatagctcctgatgaaaatattgagacattcgaccttgattacgacggg
aaaagggatagatggaacggttatgataccgctaaatatgcggaggtgatcaagaggtat
gaggctagagatgaagcaagaagaaacttcttaaaagagcagcagttaaagaagctggaa
aagaaacgtaacaagaaggttgatgaagaagagtctagtgatgctgatgaagaagaagaa
gaagatgctctgaaacatgatgaagccaaagctgatgagagcaagcaaatggatttttct
aaggtggagaaacgtgttcgtactactggtggcggcagcacaggcactgttaggaacttg
cgtatacgtgaagacactgcaaaatatcttttgaatcttgatgtcaattctgcttgttat
gatcccaagacaaggtctatgcgtgaagatccccttccaaacgctgatccaaacgagaag
ttctatgcgggagacaatcaatacagaatgagtagagaagctctagaattcaagaacctt
aatattcacgcgttgcaattatctgagaaaggccaggaagaggtcatcatgcaagctgct
ccttctcaagccgagctgcttttcaagaaatacaaagaggcgaaagagaaactaaagaaa
cagatccaagaaacaatcatggagaagtatggaaatgctgctgcatctgtggaagagatc
cctaaggagcttttatttggacaaagcgagagagaagttgaatatgaccgatgtggaaga
gttattaaaggaatggaattgtcggtacccaagagcaaatatgaagaagatgtttacata
aacaaccacacaagtgtgtgggggtcgtggtggaaggatcagcagtggggttacaaatgt
tgtcagcaaacaatcaaaaacagctattgcactggtgttgcgggaatagaggcggctgag
gaagctgcagatctaatgagaaccaatatcgaaagacatgctgcagcttctaatgatagg
tcaggtccagtagaggagaaaagatttgtgacttggggaagtgatacaccagaagatctt
gtccttgaccgagaaaaacttgcggaagctttaaagaaggaggatgagaggaagaaagag
gagaaagatgaaaggaaacgtaaatacaatgtccaatggaatgaccagattacacctgag
gagatggaagcttaccgaatgaaaagaatacacgaggatgatcccatgaagaatcttctg
cactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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