KEGG   Brassica napus (rape): 111204301
Entry
111204301         CDS       T04128                                 
Name
(RefSeq) probable pectate lyase 19
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111204301
Enzymes [BR:bna01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     111204301
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 111204301
NCBI-ProteinID: XP_022554386
Position
A3:2750119..2752327
AA seq 475 aa
MVMARLLKLMLVLCIVGLIPTIRADMSELDEYWSGRADEAREFTLQAYHSDPYEIIDHFH
ERHYDNSTDVTPTEEDNNTKPEEVENEVIEMVGSGDNSTNSTRRSLRGKGKGKWSKLKGP
CTASNPIDKCWRCRKNWSKRRKKLVKCVRGFGHMTVGGKHGRIYVVTSNLDEDMVNPEPG
TLRHAVIQKEPLWIIFKNDMSIRLNQELLINSFKTIDARGANVHIAHGAGVTMQFVRHVI
IHGLHIHHISESSGGMIRDSADHFGMRTRADGDGLSIYGSSNIWLDHVSMSQCQDGLIDA
IVGSTAITISNSHFTHHNDVMLLGAQNTYDLDKKMQVTVAYNHFGKGLVQRMPRIRWGFV
HVVNNDYTHWELYAIGGSQSPTILSQGNRFIAPPHLPHYREVTKRDYAPEEEWKHWNWRS
EKDIFMNGAYFRQSGDPNYETDHTRRNMIKPKNGYAVSKLTKYAGALDCRVGRRC
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggttatggctaggctgttaaagttgatgttagtgttatgtattgttggtctgatcccg
accatacgagccgacatgtctgagttggacgaatattggtcgggacgagctgatgaagcc
cgagaattcactcttcaagcttatcattctgatccttatgaaatcatcgatcactttcac
gaacgtcactacgacaactctactgatgttacaccgaccgaggaagataacaacacgaag
cctgaagaggtggaaaacgaggtcattgaaatggtcggatccggagataactcgacgaac
agcacgagacgaagcttaagaggtaaaggcaaaggaaaatggagtaagctcaagggaccg
tgtaccgcaagtaaccctatagataaatgttggcgttgccgtaagaactggtctaagcgt
cgcaagaagcttgtcaaatgtgtacgcgggttcggacacatgacggtcggtggtaaacat
ggacgcatctacgtggtcacaagcaacctcgacgaggacatggtgaaccctgaacccggg
acgttgcgtcacgccgtgattcagaaggagcctctctggatcattttcaagaacgatatg
agcattcgtttaaaccaagagcttctgattaatagcttcaagactatcgatgcgcgagga
gctaatgtccatatcgcgcatggcgcgggggtcacgatgcagttcgtgagacatgttatt
atccatgggttgcatattcaccatatatctgagagtagcggtggtatgatccgtgactcg
gcagaccattttggaatgaggactagagccgatggagacggtttgtctatatacggttcg
tctaacatttggcttgaccatgtctccatgtcgcaatgtcaagatggactcattgatgcc
attgttggatccactgccattacaatctccaactctcacttcactcaccacaacgacgtg
atgttgcttggtgctcaaaacacttatgacttagacaaaaagatgcaagtcacagtggct
tataaccattttggtaaaggactagtgcagaggatgccaaggatcaggtggggatttgtt
catgttgtgaacaatgactacactcattgggagctttacgctatcggaggcagtcaaagt
ccaacaattctcagccaaggaaaccgattcattgctcctccacacttacctcattacaga
gaggtgacaaagagagactatgctccggaagaagagtggaaacactggaactggagatct
gaaaaagatatattcatgaatggagcttattttagacaatctggagatcctaattatgaa
actgatcacaccagacgaaacatgattaaaccgaaaaatggatacgctgtttcaaagttg
accaaatacgcaggagcacttgattgcagagtcggaagacgctgttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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