KEGG T04128: 111215518

Brassica napus (rape): 111215518

Entry

111215518         CDS       T04128

Name

(RefSeq) nuclear pore complex protein NUP62-like

K14306

nuclear pore complex protein Nup62

Organism

bna Brassica napus (rape)

Pathway

bna03013

Nucleocytoplasmic transport

Brite

KEGG Orthology (KO) [BR:bna00001]
09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111215518
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    111215518
Messenger RNA biogenesis [BR:bna03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111215518

SSDB

Motif

Pfam:

Nsp1_C Nucleoporin_FG ATG17_like

Other DBs

NCBI-GeneID:

111215518

NCBI-ProteinID:

XP_022574780

Position

A5:2688741..2692307

AA seq 784 aa
MSGFSFGQSNTGGGSLFGSSSAASSSSASSTSSPLAFSFNQSTGFGFGATSSAAPASSSA
APSFGFGATASAPATSTTLSFGFGANASAPAASTTPSFGFGATSSAPTASTTPSFGFGAT
SSAPASSTTPSFGFGATSSAPASSTTPSFGFGATASTVTAPASSTTPSFGFGATSSTVTA
PASSATPSFGFGAPASTGFGFGSSAASSSPSLFGSSTNAPAASPGSSPFGFVTSSASQPG
ASSSSATVSAPSPFGAPASGSAFSSSLFSAPSSAASSSSPLFATSSSVPASTASLFGAQS
SATASTPSMFGAAAPSSSAPSSTPSMFGSSSASGSSQSIFGAAAASPASGSSPSIFGAAA
SSASGSSPSIFGATGSTQAIFGSSSLSGAAAASSPSQFGFSTNNTSSTTTNPLASPFSAS
TGLSFSKSTGSSTPAISASASAPSQTTSSSSSFSFATPAISAPASTTSPALFSIATTTTT
TSSSSPAATSAPSSSAAASTTTFPSFGVGSSAANSTPATSSAPAFGFTTSTSAAATTAFA
VPQIASTTATTTQTSLVVASTSGTSTTVAAPVAGAPKLPSEITGKTVEEIIKEWNTELEE
RTGRFRKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLERQLELIDTHQQEVDKA
LQSMEEEAERIYNDERKSLLDDEAASTRDAMYEQSELVERELEHMTEQIRSIIQSVNANQ
GGELEAVDGMNPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKIASQGSGADRELMMAPK
HWMS

NT seq 2355 nt +upstreamnt +downstreamnt
atgtctgggttttcgtttggtcaatcgaatactggtggaggatctttattcggatcttcc
tccgccgcgagctcctcttctgcttcatccacctcgtctccgttagctttctcattcaat
caatccaccgggtttggatttggagccacctcatcggctgctcctgcttcctcctccgca
gctccatcgttcggattcggagccaccgcgtcggctcctgctacgtccacaactctatcg
ttcggatttggagctaacgcatcggctcctgctgcttccacaactccatcgttcggattt
ggagccacgtcatctgctcctactgcttccacgactccatcgttcggatttggagccacg
tcatcggctcctgcttcctccacgactccatcgtttggatttggagccacctcatcggct
cctgcttcctccacaactccatcgttcggatttggagccaccgcatctactgtaacggct
cctgcgtcctccacaactccatcgtttggatttggagccacctcatctaccgtaacggct
cctgcttcctccgcaactccatcgtttggattcggagcgcccgcatccaccggattcggg
ttcggatcctctgctgcgtcttcatctccctctctttttggatcttctaccaatgctcct
gcggcttctcctggctcgtctcccttcggattcgtaacttcgtcggcttctcagcctggc
gcttcttcttcttccgcgactgtttcggcaccatctcctttcggagctccagccagtggt
tcagcattctcctcatccttattctccgctccttcatctgccgccagctcgagttctcct
ctcttcgcaacatcctcatctgtacctgcctcaactgcttctctattcggcgcacaatct
tcagccaccgcctctacaccttcaatgttcggcgcggcggctccgtcctcgtcagcccct
agctccacaccttcaatgtttggatcgtcatcagcctctggctcctcacagtcaatcttt
ggcgcggcggcggcgtcaccagcctctggctcctcaccgtcaatctttggagcggctgcg
tcctcagcttctggctcctcaccttccatctttggagccaccggttcgactcaggccatc
ttcggatcgtcttccttgtcaggcgcagcagcagcttcttcaccatcccagtttggattt
tccaccaacaacacttcctccactacaaccaatcccttggcttctccgttctctgcttct
accggactctctttctcgaaaagcacaggaagttccacccctgctatctctgcttctgct
tccgctccttcacaaacgacttcctcatcttcctcattctcattcgctacacccgcaatc
tcagctcctgcatccaccacatccccagcactgttttcaatagcaaccaccaccaccacc
acgtcctcttcgagtcctgctgccactagtgcaccatcttcctcagctgcagcttccaca
acgactttcccttcttttggtgtgggctcatctgcagccaacagcactccggctacttcc
tctgctccagcatttggttttactacctccacttctgctgctgcaactactgcttttgct
gtaccccagatagcatcaactactgctactacaacgcagacatctcttgttgtggcttcg
actagtgggacaagcacaactgttgcagctccagtggctggtgctcccaagttaccatct
gaaataactggcaaaactgttgaggagattatcaaggagtggaacactgagctggaagaa
cgtacagggagattccggaaacaggcaaatgcaatagctgaatgggataagcggatcctg
cagaaccgtgatgttcttctgaggcttgagattgaagttgcaaaagtggttgaaacacag
tctagtttggaaagacagctggaattaattgacactcatcaacaagaggttgacaaagct
ttgcaaagcatggaggaagaggctgagcgtatatataatgacgagcgcaaatcgcttctt
gacgatgaagcagcatcaacaagagatgcaatgtatgaacagtctgagcttgtagaaaga
gaactggagcatatgactgaacagatcagatcgataatacaatccgtaaatgcaaaccag
ggtggagaactagaagcagttgatgggatgaatccattggatgtagtagtcaggatcttg
aacaatcaactcagttccttgatgtggattgatgagaaagcagaggagttctcatctcgg
attcaaaagatcgcatctcaaggctctggtgcagaccgtgaactgatgatggctccaaag
cactggatgtcttga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF

DBGET integrated database retrieval system