KEGG   Brevundimonas naejangsanensis: DA69_05885
Entry
DA69_05885        CDS       T04375                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bne  Brevundimonas naejangsanensis
Pathway
bne02024  Quorum sensing
bne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DA69_05885
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DA69_05885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bne03019]
    DA69_05885
   03036 Chromosome and associated proteins [BR:bne03036]
    DA69_05885
Messenger RNA biogenesis [BR:bne03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DA69_05885
Chromosome and associated proteins [BR:bne03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    DA69_05885
SSDB
Motif
Pfam: Hfq
Other DBs
NCBI-ProteinID: ANF54311
UniProt: A0A172Y515
Position
complement(1241555..1241800)
AA seq 81 aa
MSQDKRQNLQDTFLNSVRKTKTPLTIFLVNGVKLQGIVTWFDNFCVLLRRDGQSQLVYKH
AISTIMPSAPVQLYEPDAEED
NT seq 246 nt   +upstreamnt  +downstreamnt
atgtcgcaagacaaacgacagaatcttcaggacaccttcctgaacagcgtccgcaagacg
aaaaccccgctgaccatcttcctggtgaacggcgtcaagcttcagggcattgtgacctgg
ttcgacaacttctgtgtgcttctgcgtcgggacggccagtcgcaactggtgtataagcac
gccatctcgaccatcatgccgtccgcgcccgtgcagttgtacgagcccgacgccgaagaa
gactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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