KEGG   Bacteroides ovatus: Bovatus_02698
Entry
Bovatus_02698     CDS       T04113                                 
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
boa  Bacteroides ovatus
Pathway
boa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bovatus_02698 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boa03019]
    Bovatus_02698 (pnp)
   03016 Transfer RNA biogenesis [BR:boa03016]
    Bovatus_02698 (pnp)
Enzymes [BR:boa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Bovatus_02698 (pnp)
Messenger RNA biogenesis [BR:boa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Bovatus_02698 (pnp)
Transfer RNA biogenesis [BR:boa03016]
 Prokaryotic type
  tRNA degradation factors
   Bovatus_02698 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase RNase_II_C_S1
Other DBs
NCBI-ProteinID: ALJ47323
UniProt: A0A1G6GA29
Position
complement(3321377..3323503)
AA seq 708 aa
MINPIVKTIELPDGRTITLETGKLAKQADGSVMLRMGNTMLLATVCAAKDAVPGTDFMPL
QVEYKEKFAAFGRFPGGFTKREGRASDYEILTCRLVDRALRPLFPDNYHAEVYVNIILFS
ADGVDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQFVINPTFEQLEKADMDLMV
AATYENIMMVEGEMHEVSEAELLEAMKVAHEAIKVHCKAQMELTEEVGKTVKREYNHEVN
DEDLRKAVREACYEKAYAVAASGNNNKHERFAAFEAIREEFKAQFSEEELDEKGALIDRY
YHDVEKEAMRRSILDEGKRLDGRKTTEIRPIWCEVGPLPGPHGSAIFTRGETQSLTSVTL
GTKLDEKIIDDVLEHGKERFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRALKGQIP
ADYPYVVRVVSDILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIKNPGEEKYA
VLSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEILERALNQAKEGRMHILGK
ITETIAEPRADLKEHAPRIETMTIPKEFIGAVIGPGGKIIQGMQEETGAVITIEEIDGMG
RIEVSGTNKKCIDNAMRMIKAIVAVPEVGEVYKGKVRSIMPYGAFIEFLPGKDGLLHISE
IDWKRLETVEEAGIKEGDEIEVKLIDVDQKTGKFKLSRKVLMPRPEKK
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgattaacccaattgttaagacaatcgagttacctgatggaagaaccatcacactcgag
acgggaaagttggcaaaacaggcagacggttctgtaatgctccgcatgggaaacaccatg
ttgttagctactgtttgtgccgctaaagatgcagttcccggaacagattttatgccttta
caggtagagtacaaagaaaaatttgcggcattcggccgtttccctggtggtttcaccaag
cgagaaggtagagcttctgattatgagattctcacttgccgtcttgtcgaccgtgctctc
cgtcctttattccccgataattatcacgcagaggtatatgtgaacatcatcctcttttct
gctgatggtgtggatatgccggatgcattggcaggacttgccgcttctgcagcacttgcc
gtttcagatattcctttcaacggaccgatttctgaagtacgtgtagcacgtatcgacggt
cagttcgttatcaatcctacttttgaacaactggaaaaagctgatatggatctgatggtg
gccgctacttatgagaacatcatgatggtagaaggtgaaatgcacgaagtatccgaagct
gaattgctggaagcaatgaaagtagctcatgaagctatcaaggttcattgtaaagcacag
atggagttgactgaagaggttggaaaaacagtgaaacgtgaatacaaccatgaagtgaac
gacgaagatttgcgcaaggctgttcgtgaagcatgctacgaaaaagcttacgctgttgcc
gcttccggaaacaataacaaacacgaacgttttgctgctttcgaagctatccgtgaagaa
ttcaaagctcaattctctgaagaagagttggacgaaaagggtgcgttgatcgaccgttac
taccacgatgtagaaaaagaagccatgcgccgttctatccttgacgaaggtaagcgtttg
gatggtcgtaagactactgaaatccgcccgatctggtgtgaggttggtcctctgcctggt
cctcacggatctgctatctttactcgtggtgaaacacaatcactgacttctgttactctg
ggtaccaaactggatgagaagatcattgacgatgttttggaacacggaaaagaacgtttc
ttattgcattataatttccctcctttctctacaggtgaagcaaaagcacaacgtggtgta
ggtcgtcgcgaaatcggtcacggtcacttggcttggcgtgctttgaaaggacagattcct
gctgactatccgtatgtagtacgtgtggtttcagatattctcgaatctaacggctcttct
tctatggctactgtatgtgccggaacattggcattgatggatgctggtgtgaagatcaag
aaaccggtatcaggtatcgctatgggattgattaagaatccgggcgaagaaaaatatgct
gtattgtctgatattctgggtgacgaagaccacttgggtgatatggacttcaaagtaacg
ggaacaaaagatggtattacggctacccagatggatatcaaggtagacggtctgtcttac
gaaattctggaacgtgctttgaatcaggcaaaagaaggacgtatgcacattctgggtaag
attactgaaacaatcgctgaaccacgtgctgacctgaaagaacatgctccacgcattgaa
acgatgacaattcctaaagaatttatcggtgctgtaatcggccctggtggaaaaatcatc
caaggtatgcaggaagaaaccggtgctgtgattactatcgaagaaattgatggtatggga
cgcatcgaagtttccggaacaaacaaaaaatgtattgataatgcaatgcgcatgattaaa
gcaatcgttgctgttcctgaagtgggcgaagtttataaaggtaaagttcgttctattatg
ccttacggtgcattcatcgaattcttgccgggcaaggatggtttgctgcacatctctgaa
attgattggaagcgtctggaaacagtagaagaagctggaattaaggaaggtgatgaaatc
gaagtaaaactgattgatgttgaccagaaaactggtaaattcaaactttcaagaaaagtg
ttgatgccaagaccagaaaagaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system