KEGG   Brassica oleracea (wild cabbage): 106301197
Entry
106301197         CDS       T04124                                 
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
  KO
K08739  DNA mismatch repair protein MLH3
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    106301197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boe03400]
    106301197
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     106301197
SSDB
Motif
Pfam: MutL_C HATPase_c_3 DNA_mis_repair HATPase_c DUF6300
Other DBs
NCBI-GeneID: 106301197
NCBI-ProteinID: XP_013592998
UniProt: A0A0D3DHU8
Position
C7:46994599..47000773
AA seq 1195 aa
MKTIKPLPEGVRRSMRSGIIMFDMTRVVEELVFNSLDAGATKVSIFVGVVTCSVKVVDDG
SGVSRDDLVLLGERYATSKFHDFIDVETASESFGFRGEALASISDISLLEITTKAVGRPN
GYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYNQPVRQKYMQSSPKKVLESITKCVFR
IALVHSNVSFSVLDIDSDEELLQANPSASAFSLLMSDAGTEALNSLCKVDVKDGTLNVSG
YISGPRDSFKVLQYIYINSRFVSKGPIHKLLNNFAASFDSTDDWKPTDGLQTGRRSRIQP
CPGYILCITCPRHLYELSFEPSKTNVEFKNWEPILTLIERIILANWKKDEGLEICDGRAD
LLAKGDRQDLIDDMGRLEKDAEWPETMEPTKKKLKRSNDETPSSFLFPPSADFKRDDGYL
SEGKEEWSPKYELGMKIQNLKEQDTVAEFDRQTASFLQPCDTDMQKNEDFPQVTGFLETR
LVSGAKCSKQFLTRCQISTPSVNHDFMEDADVLNFQFEDVEDELDVSNCIGNHLLRGCSS
RGRLALHEPNLSRGEGSESGMRMKLDDKRTNSLIHVLETREGDSYRDVLSDTHEFHGRTR
TPDCSLGSSWQESDWFNPQHISDSTSVGNGEDFNINRIDIAEFRSYEDNFVKKIYSSSAN
VGRSGPGSFRLSSECSTVFSTSPSATEWESDYQKGCQILEGSLDLGRTPDPGYFFSAAND
VKFDHEAIPQISCRKTSTDSFADIQNGTESGETIFQSLWGHADNVGIEQHNIRKDTFSYR
YGSKNNVGKRRSRRSRSAPPFYQEKKRFVSLSCRSDTKSKNSDPSVPDDLECLTQPCNAS
HIFDDVSYDHLQEPEKSMSSASDLKASAGCSIVHSEARYEDGDEDLSSEENLDPVKSTTK
WRHNCPVPQVAKESHELHDQDSVLDICSGLLHLRSDESLVPESINRQSLEDAKVLQQVDK
KYIPIVACGTVAIVDQHAADERIRLEELRKKVLAGEARTVTYLSADQELVLPEMGYQLLQ
SYSDQIRDWGWICSINVEGSTSFKKSMSIIQRKPTPITLNAVPCVLGVNLSDVDLLEFLQ
QLADTDGSSTIPPSVLRVLNSKACRGAIMFGDSLLPSECSLIIEGLKQTSLCFQCAHGRP
TTVPLVDLKALHKQIAKIEPRQPWHGFERREITLDRAKSRADEAKGKKVAPVANL
NT seq 3588 nt   +upstreamnt  +downstreamnt
atgaagacgattaagcccttgccggaaggcgtccgtcgctccatgcgatccggaatcatc
atgttcgacatgacgagggtcgtggaggagctcgtcttcaacagtctcgacgctggtgcg
accaaggtgtctatcttcgtgggcgttgtgacatgctctgtgaaggttgtggatgatgga
tctggcgtttccagagatgatttggttttgttgggagaaagatatgctacgtcaaagttt
cacgacttcatagatgtggagacagccagtgaaagttttggattccgaggagaggccttg
gcttccatatcagatatctcgttgcttgaaatcacgactaaagctgttgggaggcctaat
ggttatcggaaggttatgaagggatccaagtgtcttcatctaggaattgacgatgataga
aaagactctggcacgactgtaactgtccgagatctgttttacaatcaacctgtgagacaa
aaatatatgcaatccagccccaagaaagtgttggaatctataacaaagtgtgtgttccgg
attgcgcttgtgcactctaatgtttccttcagtgttcttgatatcgatagtgatgaagag
cttctccaagccaatccttctgcttcagcattttctctactgatgagtgatgcagggacc
gaagctttaaactctctttgtaaagtagacgttaaagatggcacgttgaatgtctctggg
tatatatctggtcctcgagatagtttcaaggttttgcagtacatatatatcaattcaaga
ttcgtaagcaaaggtcccatacataagctgctgaacaacttcgctgctagttttgattct
acggatgactggaagcctacagatgggctacaaacaggacgacgtagcagaattcaaccc
tgtcctggttacatactgtgcataacatgtccacgtcatctttatgaattatcatttgaa
ccatcaaagacaaacgtcgagttcaagaactgggaacctatacttaccttgatagaaaga
atcattctagcgaactggaagaaagatgagggtcttgaaatttgtgatgggcgagctgat
ctgctggcaaaaggtgatagacaagacctgattgatgacatgggtagacttgaaaaagat
gcagagtggccagaaactatggaacctacaaaaaagaagctcaagagaagtaatgatgag
acaccttctagttttctctttcccccgtctgctgactttaaaagagatgatggttatttg
tcggaaggaaaggaggaatggtctccaaaatatgaattaggaatgaaaattcagaatctt
aaagaacaagacactgtagctgaatttgaccgtcagactgcttcttttctacagccatgt
gacacagatatgcaaaagaatgaagactttccgcaagttactggcttcctagaaacaaga
ttggtttctggcgctaagtgcagcaaacagtttctaacaagatgccagattagcacaccc
agtgtcaaccatgattttatggaagatgcagacgtattgaattttcagtttgaagatgtt
gaagatgagttggatgtcagcaattgcattggaaatcaccttttgcggggttgctcctca
agaggaaggctagcccttcatgagcctaatctatctcgtggtgaagggtctgaatcaggc
atgcgtatgaaacttgatgacaaacgaactaattcactgattcatgtcctagagaccaga
gaaggtgattcctaccgtgatgttctttctgatactcatgaatttcatggaaggaccagg
actcctgattgttccctagggagttcatggcaggaatctgattggtttaatccacaacat
atctcagatagtacaagtgttggaaatggagaagattttaacatcaaccgcatagatatt
gcggaatttcgttcttatgaagacaattttgtgaagaaaatttactcttcctcagccaat
gtcgggaggtctggtcctggtagtttccgtttgagttctgagtgctctacagtgttctct
acatctccttctgcgaccgagtgggagtctgattatcagaaaggttgtcaaattcttgaa
gggagtttggacctgggaaggacgcctgaccctggatactttttcagtgctgccaacgac
gtcaaatttgatcatgaggccatacctcaaatcagttgccggaaaaccagcacagattct
ttcgcagatattcagaatggcactgagtcaggtgaaacgattttccagtcattgtgggga
catgcagataatgtgggtattgaacaacataatatcaggaaggacacatttagttatagg
tatggttcaaagaataatgttggtaaacgaaggtcaagaagaagccgctctgctcctcca
ttttatcaagagaaaaagagatttgtcagtttaagttgtagatcagacacaaaatcaaag
aactctgatccatcagtacccgatgatttggagtgcttgacacaaccctgtaatgcatct
catatctttgatgatgtgtcatatgaccacctacaagaaccagaaaaaagtatgagttcg
gcctcagacttgaaagcatctgctggttgcagtattgtgcactcagaggcccgatatgag
gatggagacgaagatttgagctcagaggaaaatctggatccagttaaatccacaacgaaa
tggcgccataactgtccggtccctcaggttgccaaggaatcacacgagcttcatgatcaa
gatagtgtacttgatatatgttcaggacttttgcacctgcgatccgatgagtccttggtt
cctgaatctataaacagacagtcccttgaggatgctaaggttctacaacaggtggataaa
aaatacatcccaattgttgcttgtggaacagttgctatcgttgatcagcatgctgccgat
gaaagaattcgattggaagagctgcgtaaaaaggtcctggctggggaagcaaggacagtc
acctatttgagtgcagaccaagagttggtcctaccagagatgggttatcagttactccag
agttattcagaccagataagagactggggttggatctgcagcattaatgtagaagggtca
acgtcctttaagaagagcatgagcatcattcaacggaaaccaactccaatcacacttaat
gcggtcccatgcgttctgggtgtaaatctatcagatgttgatctattagagtttcttcag
cagcttgctgatactgacggatcatcaacaattcctccatctgttcttcgagtcctgaac
tccaaagcatgtagaggtgcaattatgttcggagattctctgttaccctcagaatgctct
ttaatcatcgaaggactaaagcagacctcactgtgtttccagtgtgctcatgggagacca
acgacagttcctctagtcgatttgaaggcattacacaaacagatagcaaagatcgaacca
agacaaccgtggcatgggttcgaacgcagagaaatcacacttgatcgtgctaaatcacgc
gcagatgaagctaaaggcaaaaaagttgcacctgtagcaaacctttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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