KEGG   Brassica oleracea (wild cabbage): 106313948
Entry
106313948         CDS       T04124                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106313948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106313948
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106313948
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     106313948
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 106313948
NCBI-ProteinID: XP_013607339
UniProt: A0A0D3EAB4
Position
C9:complement(34105712..34106785)
AA seq 283 aa
MTMMDPPDADLSDRTGSIVIRSVWAENLDSEFELISRIVEDFPFISMDTEFPGVIHKAEP
ALLRRGNPGYLYNLLKSNVDSLSLIQVGLTLSDADGNLPDLGGDGRQFIWEFNFRDFDVD
RDPHAADSIELLRRHGIDFERNRSEGVVSERFAELMMSSGLICNESVSWVTFHSAYDFGY
LVKILTRRELPSSLGEFLRLLRAFFGERVYDVKHMMRFCERRLYGGLDRLARSLEVNRAV
GKCHQAGSDSLLTWHAFQRMRDLYFVEDGPEKHAGVLYGLEVF
NT seq 852 nt   +upstreamnt  +downstreamnt
atgacgatgatggatcctcctgatgcagatctctccgatcgtaccggatcaatcgtgatt
cgttcggtctgggctgagaatctcgactctgagtttgagctgattagccgaatcgtcgaa
gatttccccttcatctccatggacaccgagtttcccggcgttattcacaaggcggagcca
gctcttctccgccgtggaaaccccggttatctctacaaccttctcaaatccaacgtcgac
tctctcagcctcatccaagtcggcctcactctctccgacgccgacggcaacctccccgat
ctcggcggcgacgggcgtcaattcatctgggagttcaacttccgcgacttcgacgtggac
cgcgacccccacgcggcggactcgatcgagctcctccgccgtcacgggatcgatttcgag
cgtaaccgcagcgaaggggtcgtgtcggagaggttcgcggagctgatgatgtcgtcgggg
ctgatctgcaacgagtcggtgagctgggtgacgtttcacagcgcgtacgatttcggttac
ctggtgaagatcctcacgcgccgggagcttccgagctcgctgggagagttcctccggctg
ctcagggcgtttttcggcgagagagtttacgatgtgaagcacatgatgaggttctgcgag
aggagattgtacggcggtttggaccggttggctcggtcgcttgaggttaaccgggcggtt
gggaagtgtcatcaggccggttcggatagcttgctgacgtggcatgcgtttcagaggatg
agggacttgtacttcgttgaggatgggccggagaaacacgccggagttttgtacggttta
gaggttttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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