KEGG   Brassica oleracea (wild cabbage): 106317267
Entry
106317267         CDS       T04124                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 4 isoform X1
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00900  Terpenoid backbone biosynthesis
boe01100  Metabolic pathways
boe01110  Biosynthesis of secondary metabolites
Module
boe_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    106317267
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:boe01006]
    106317267
Enzymes [BR:boe01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     106317267
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     106317267
    2.5.1.29  geranylgeranyl diphosphate synthase
     106317267
Prenyltransferases [BR:boe01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   106317267
SSDB
Motif
Pfam: polyprenyl_synt UbiA
Other DBs
NCBI-GeneID: 106317267
NCBI-ProteinID: XP_013610565
UniProt: A0A0D3E384
Position
C9:8106081..8107190
AA seq 369 aa
MEAQTTILYLLLFLSLNFVFQTLKQRLSPANTRRLTRFLHLPFKHPAAAAVFARQDVHEF
LDTSTQVENNEDDSEFDFKPYMKTKAESINRALDKAIPLVEPLNIHKAMRYAILAGGKRV
RPILCLAACELVGGEERSAVPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGE
SVAILSGGALLALAFEHLTEADVSPERMVRAVKELAKSIGTKGLVAGQAMDLSSEGLDQN
DVGLKELEFIHVHKTGSLLEASAVIGAVIGGGSEEEVEKVRRFARCIGLLFQVVDDILDG
TKSSEELGKTAGKDQVAGKLTYPKVLGLEESKEFVKRLKKEAREHLKGFDSDKAKPLVAL
ADFIANRNN
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggaagctcaaactaccattctctatctcttactcttcctatctctaaacttcgtgttt
caaactctaaaacaacggctgagtccggcaaatacgcggcgactaacccgtttcctccac
ctcccgttcaagcatcccgccgcagccgccgttttcgccagacaagatgtccatgagttt
ctcgatacatcaacccaagtagagaacaacgaagacgattccgagttcgacttcaaacct
tacatgaaaaccaaagcagagtcaataaacagagcgctagacaaagccatcccactcgtc
gagcctctcaacatccacaaggcaatgcgctacgcgatcctcgccggcggcaaacgcgtc
agaccaatactctgcctcgcggcctgcgagctagtcggaggggaagagcgttcggcggtt
ccggcggcttgcgcggtcgagatgattcacacgatgtcactcatcaaagacgatcttcct
tgcatggacaacgacgacctccggcgaggtaagcccacgacgcacaaagtcttcggagaa
agcgtcgcgattctctccggcggcgcgctcctagctctggccttcgagcatttgacggaa
gctgacgtgtcgcctgagagaatggttagagcggttaaagaactggcgaagtctataggg
acgaaagggctcgtggcgggacaagcgatggatttgagcagcgaaggtttggatcaaaac
gacgtcgggttgaaggagcttgagtttattcacgttcataaaaccggttcgctgcttgag
gcttcggcggttatcggagcggttattggaggtggttcggaggaagaggttgagaaggtg
aggaggttcgcgaggtgtattgggttgttgtttcaggtggttgatgatattttggatggg
actaagtcgtcggaggagctggggaagaccgccgggaaagatcaggtggccggaaagctg
acgtatccgaaagtgttgggacttgaggaaagtaaagagtttgttaagaggctgaagaaa
gaggcgagggaacatcttaaagggtttgattcagacaaagccaaacccttggtagctctt
gctgacttcattgccaacagaaataactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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