KEGG   Brassica oleracea (wild cabbage): 106321815
Entry
106321815         CDS       T04124                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:3.6.4.13]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:boe03009]
    106321815
Enzymes [BR:boe01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     106321815
Ribosome biogenesis [BR:boe03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    106321815
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII
Other DBs
NCBI-GeneID: 106321815
NCBI-ProteinID: XP_013615510
UniProt: A0A0D3AHW3
Position
C2:1155969..1159262
AA seq 594 aa
MDPSSSNTNKALTETRFSDLEPPLSEDIIEALDRSGFEFCTPVQAATIPLLCRHKDVAVD
AATGSGKTLAFVLPLIEILRRSTSYPPKAHQVMGVIISPTRELSTQIYNVAQPFVSTLPN
VNSVLLVGGREVKSDMSTIEEGGCNLLIGTPGRLSDIMERMEILDFRNLEILILDEADRL
LEMGFQKQVNSIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESKSESSSQ
QLTNSKVPSGLHLEYLVCEADKKSSQLVDLLVENAKRKLIVYFMTCASVDYWGLVLSKIP
ALKSISLIPIHGDMKQNARDKALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQD
PNMFNHRVGRTARLGKEGRAIVFLLPEEEDYVEFMRRRGVPCQEKECSEEASDVIPIIRS
LAMKDRAVLEKGLKAFVSFVRGYKEHHCSYIFRWKSLEIGKLAMGYGLLYLPSMSEVKQH
RLSSEGFTPVADVKFEDIKFKDKSREKQRKQNMQARKEKRQQEKKEKGKKNSKKAVVAAA
ADSNKRKLTGKQRQTIQTAEDEEEMARDYRLLKKLKKGSIKEDDFAKLTGADDF
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggatccatcatcgtcgaacacaaacaaagcgttaacggagacgcgtttctccgacctc
gagcctcccctctccgaagacatcatcgaggccctcgaccggtccggtttcgagttctgc
actccggttcaggccgcgacgattcctttgctctgccgccacaaggatgtcgccgtcgac
gccgccaccggctcgggaaaaaccctagctttcgtcttaccattaatagagattctccgc
cgctccacctcttaccctcccaaggctcaccaggttatgggggtgattatatcgccgaca
agagagttatcaacgcagatatacaacgtggcacagccatttgtctccactttgccgaat
gtgaactctgtgctgctcgttggaggccgagaggtgaagtccgacatgagcactatagaa
gaaggaggatgcaatctcttgatcggcacacctggaaggctctctgatataatggaacga
atggagattctcgatttcagaaaccttgagattcttatcttagatgaagcagataggcta
ttggagatggggttccagaagcaggtgaacagcatcatatctcgcttgccgaagcagcgt
aggactggtctcttttcagctacacagaccgaaggtgttgaagagctggccaaggctggg
cttaggaaccctgtgagagttgaagttcgagctgagtcaaagtctgaatcatcatcccag
caattaacaaactccaaagtgccttctggtcttcaccttgagtatttggtatgcgaagca
gataagaagtcatcgcaactagtggatctcctcgtcgagaatgcaaagagaaagcttata
gtatactttatgacttgtgcttctgttgattactggggactagtgctttcgaaaatccct
gctctgaagtccatttctttaatccctatccatggggatatgaagcagaatgcaagagac
aaggcgttagcttcgtttactgaagcatcaagcggtgtccttttgtgcactgatgtggct
gcacgtggacttgatattccaggcattgattacgtagttcagtatgatcctccacaagac
cctaatatgttcaaccatagagttggcagaactgcaagactgggaaaagaaggaagagcc
atcgtttttttactgcctgaggaagaagactatgtagagtttatgcggagaagaggggtc
ccttgtcaagagaaagaatgttctgaggaagcatctgatgtcatccctataatacggtca
ctagccatgaaggacagggcagtgttggagaagggactaaaggcgtttgtttcctttgtc
cgtggttataaggagcatcactgctcttacattttcagatggaaaagcctagaaatagga
aagttagcaatgggatatggactcttgtatcttccttcaatgtctgaagtcaaacaacac
agactctccagtgagggtttcacacctgttgcagacgtcaagtttgaggacatcaagttc
aaggacaaatctagggagaagcagaggaagcagaacatgcaagcaaggaaagagaaacgg
caacaagagaaaaaggagaaaggcaagaagaactcgaaaaaggcggttgttgctgctgcc
gcagattctaacaagaggaagttgacaggaaagcagagacaaaccatccaaaccgcggaa
gatgaagaagagatggctcgagattatcggttacttaagaaactcaagaaaggttctatt
aaagaagatgattttgctaaacttacaggagctgatgacttctaa

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