KEGG   Brassica oleracea (wild cabbage): 106328080
Entry
106328080         CDS       T04124                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:boe03041]
    106328080
   03009 Ribosome biogenesis [BR:boe03009]
    106328080
Enzymes [BR:boe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     106328080
Spliceosome [BR:boe03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    106328080
Ribosome biogenesis [BR:boe03009]
 Eukaryotic type
  90S particles
   Helicases
    106328080
  Pre-60S particles
    106328080
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII AAA_22
Other DBs
NCBI-GeneID: 106328080
NCBI-ProteinID: XP_013621894
UniProt: A0A0D3BC07
Position
C3:complement(27778264..27781896)
AA seq 575 aa
MVELEKKSSDEVKKRIRKRNRGKKNEQQRAEEEEETHMVEEKADEVQNKKEKKVKKVKSQ
GGDKTEEEVEAKEEEELDEEKKMVVVVGKGIMTNETFESLELSEQTFEAIKTMGFEHMTQ
IQAGSIPPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELA
IQTKNVAEELLKHHSLTVSMVIGGNNRRTEAQRIANGSNLLIATPGRLLDHLQHTKGFIY
KHLKCLVIDEADRILEENFEEDMNKILKILPKTRQTALFSATQTSKVQDLARVSLTSPVL
VDVDDGRRKVTNEGLEQGYCVVPSEKRLLLLISFLKKNLNKKIMVFFSTCKSVQFHAEIM
KLINVESCDIHGGLDQNRRTKTFFDFMKAEKGILLCTDVAARGLDIPSVDWIIQYDPPDK
PTEYIHRVGRTARGEGAKGKALLVLIPEELQFIRYLKAAKVPVKELEFNEKKLLNVRSAL
EKYVANDYNLNKIAKEAYRAYIAAYNSHSLKDIFNVHRLDLQAVALSFCFSSPPKVHLNI
ESGAGKVRKARNQQGRNGFSPYSPYGKGKSTPKEA
NT seq 1728 nt   +upstreamnt  +downstreamnt
atggttgagctggagaagaagtccagtgatgaggtgaagaagaggataagaaagcgtaac
cgtgggaagaagaatgagcagcaaagagccgaagaagaagaagaaacccacatggtagag
gagaaggctgatgaagtccagaacaagaaagaaaagaaggttaagaaagtgaagtctcag
ggaggagacaaaaccgaggaagaggtggaagcaaaggaagaagaagaactagatgaagag
aagaagatggtggttgttgttgggaaagggataatgactaatgagacttttgaatccttg
gagttgtctgagcagacttttgaagctatcaagacgatgggctttgagcacatgacgcaa
attcaagctggatcaattcctcctcttttggaaggaaaagatgttcttggtgctgccagg
actggttccggtaaaacccttgctttcctcataccggctgtagagttgctgtttaaagag
cgtttctctcctcgcaacgggactggtgtcatcgttatttgccccactagagaacttgcc
atccagacaaaaaatgtggcggaggagctactcaagcatcattcgctgacggtcagcatg
gttattggtggcaataacagaaggacagaagctcaacgtattgcaaatggttctaatttg
ctgattgcaactcctgggcgtcttcttgaccatcttcaacatacgaagggtttcatttat
aaacaccttaagtgccttgtgatcgatgaagctgataggatactggaggaaaattttgag
gaagatatgaacaagattctaaagattttaccaaagactaggcaaaccgctctattctct
gccacacagacctccaaggttcaagatctcgcacgggtgtcattaacgtctcctgttctt
gttgatgtcgatgatggtagacgcaaggtgacaaacgaaggattggagcaaggctactgc
gttgttccgagcgagaaaagacttctgcttctaatctctttcttgaaaaagaacctaaac
aagaaaataatggtcttcttctcgacgtgcaagtcggttcagttccacgccgagatcatg
aaactaatcaacgtcgagagctgtgacatccatggggggctggatcagaaccggagaact
aaaacctttttcgactttatgaaagcagagaaaggtatcttgctgtgtactgatgttgct
gctcgtggtctcgatattccttccgtggactggattatacagtatgatcctccagacaag
ccaacggaatatatacatagggttggccgaacagcccgtggagaaggagcaaagggaaag
gcattgcttgtcttgatccctgaagagcttcagtttatacggtacctcaaggctgcaaaa
gtacctgtgaaagagcttgagttcaatgagaagaagcttttgaatgttcgatctgctctg
gagaaatatgttgccaacgactataatctgaacaagatagccaaggaagcgtacagggct
tacatcgcagcgtacaactcgcattctctgaaagatatctttaatgttcaccggctcgat
cttcaggcggttgctctatcgttctgcttctcttcgccgccaaaagtgcatctgaacata
gagagtggagctgggaaggtgaggaaggcgaggaatcagcaaggtcgcaatggcttctct
ccttacagtccctatggcaaaggcaagtccacacctaaagaggcatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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