KEGG   Brassica oleracea (wild cabbage): 106336283
Entry
106336283         CDS       T04124                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106336283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:boe03009]
    106336283
Ribosome biogenesis [BR:boe03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    106336283
SSDB
Motif
Pfam: Utp21 WD40 ANAPC4_WD40 NBCH_WD40 WD40_like VID27 MIOS_WD40
Other DBs
NCBI-GeneID: 106336283
NCBI-ProteinID: XP_013630526
UniProt: A0A0D3B8G2
Position
C3:19745276..19750656
AA seq 911 aa
MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAFQIYNCAKLNLVIISPQLPKKIR
ALASYRDFTFAAFGNEIAVFKRAHQVATWSKHVAKVDLLLLFGEHVLSLDVEGNMFIWAF
KGIEEHLAPVGHVELCEKFTPTCIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLYQFKGW
GSPVCCCVSSPALDVVAIGCADGKIHVHNLKLDQEIVTFEHASRGAVTALSFSTDGRPLL
ASGGSFGVISIWNLNKRRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTN
DGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSVIQEQQSRELSQRHISRR
AKKLRLKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAEAYVWRLQNFVLGEHILKPC
PENPTPIKACAISACGNFAVVGTASGWIERFNLQSGISRGSYMDKSETRSYSHDGEVIGV
ACDSTNTLMISAGYHGDIKVWDFKKRELKSRWDVGCSLVKIIYHRVNGLLATVANDFVIR
LYDVVALRMVREFRGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDVILAKQIDGVHVDVP
ITALSLSPNMDILATAHSDQNGVYLWVNQSMYSGAPNVDSYASGKNVVNVRLPSVSALRS
SEADADDKKTQVSENSESATAASFSISPEQIPELVTLSLLPKSQWQSLINLDIIKARNKP
IEPPKKPEKAPFFLPSIPSLSGDIVFKSNESDNDGEDEDKNKDSKNSMKNFDALESPFSK
LLKSSWDSKYFSNFTDYIKGLSPSALDIELRMLEIIDEDVEEELIQRPEFISIGQLLDYL
IHEITCRNNFEFMQAVMRLFLKIHGETIRCHPSLQEKARKLLETQSLVWQKMDKLFQSTR
CIVTFLSNSQF
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgggaatcttcgaaccgtttagagcgataggatacataacgagcactgttcctttctcc
gttcagcgactgggcaccgagaccttcgttaccgtcagcgtcggcaaagctttccagatt
tacaactgtgccaagcttaacctagtcattatcagtcctcaactcccgaagaaaatcaga
gctcttgcttcataccgtgacttcacttttgctgcttttggtaatgaaattgctgttttc
aaacgtgcccatcaggtagcaacttggagcaagcatgttgctaaagttgatctgcttctc
ttgtttggagaacacgtcctaagtcttgacgttgagggaaacatgttcatttgggcattc
aaaggaatcgaagaacatctagctcctgttggacatgttgaactttgtgaaaagttcact
cctacttgtattgttcatccagacacttacttgaacaaggttcttgttgggagccaagag
ggtccgctgcagctgtggaacataaatactaagaagatgctgtatcagtttaagggttgg
ggttcacctgtctgctgttgtgtttcgtcccctgccttggatgttgttgccatcggttgt
gctgatggaaagatccatgttcataacttaaaattggaccaagagattgtaacgtttgaa
cacgcctcgcgaggtgccgttactgctttgtccttcagcacagatgggcgtcctcttctt
gcatctggaggttcttttggtgtgataagcatctggaatcttaacaaaaggaggcttcag
tcagtcattagagatgcacatgacagctctataatctcattgaactttttagcaaatgaa
cctgtgctaatgagtgcatcagcagataactcactcaagatgtggatttttgacacaaat
gatggtgatcctcgtctactacgcttccgttctgggcatagcgccccacccctgtgtatc
aggttctactctaatgggcggcacattttgtctgctggccaggatcgtgctttccgcctg
ttctctgtcatccaggagcaacaaagtagagagctgtctcaaaggcacatatccaggcga
gccaaaaaattgcgtttgaaggaggaagagctgaaactgaagcctgttattgcgtttgat
tgcgccgaaattagggagcgtgattggtgcaatgtggttacatgccatatggatacagca
gaagcatatgtatggaggcttcaaaactttgttcttggagaacatatcctcaaaccatgc
cctgaaaatccaacaccaattaaggcttgtgcaatcagtgcgtgtggtaactttgcagtt
gtgggaactgccagtggctggattgagagattcaacctccaatctggaatcagccgtggt
agctacatggataagtcagagacaagaagttactcccatgatggtgaagtgattggagtt
gcttgcgactccacaaacacactcatgataagtgctggataccatggtgatataaaggtt
tgggatttcaagaagagggaactaaagtccaggtgggatgttgggtgttcactggttaaa
atcatttaccaccgtgtaaatggtctcttggctacggtggcaaatgattttgttatccgc
ttgtatgatgttgttgcactgaggatggtccgtgagtttagaggccatacagaccgtata
acagatttgtgctttagtgaggatggcaagtggcttctctcatctagcatggacggaagt
ctcagaatctgggatgtgatactggcgaaacagatcgatggagtgcatgtcgatgtgcca
ataacagcattgtctttatcgccgaacatggacattttggcaacagctcattctgatcag
aacggtgtctacttgtgggttaaccaatccatgtactctggagctccaaatgttgactcc
tatgctagtgggaagaatgtagtgaatgttagattgccttcagtctctgcgttgagatct
tctgaagctgatgctgatgataagaagacgcaagtttcagaaaattctgaaagcgcaact
gctgccagcttctcgatttcccctgaacagattccagagcttgttactctgtctctttta
ccaaaaagccagtggcaaagcttgatcaacttagatataatcaaggcccggaacaaacca
atagagcctccaaagaaacctgagaaggctccttttttcttgccctcgattccatcgctg
tcgggagatatagtgttcaagtcaaatgaatcagacaatgatggggaagatgaggacaag
aataaagactccaagaatagcatgaagaattttgatgcattggaatctccattctcaaaa
cttctcaagtcctcttgggattcaaaatacttttcaaatttcacagattacattaagggt
ttatccccatcagctttggacattgagctaaggatgcttgaaattatagatgaagatgtt
gaagaagagcttattcaaagacctgagtttatatctattggacagcttctggattacctc
atccatgagatcacttgcagaaacaactttgagtttatgcaggcagttatgagattgttt
ctgaagatccatggtgagaccatacggtgccacccaagtttacaagagaaggcaaggaag
ctgttagaaactcagagtttggtgtggcagaagatggacaagcttttccagagcacaaga
tgcatagttaccttccttagcaattcacagttttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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