KEGG   Brassica oleracea (wild cabbage): 106339084
Entry
106339084         CDS       T04124                                 
Name
(RefSeq) chaperonin CPN60-like 1, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106339084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106339084
   03110 Chaperones and folding catalysts [BR:boe03110]
    106339084
   03029 Mitochondrial biogenesis [BR:boe03029]
    106339084
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:boe04147]
    106339084
Enzymes [BR:boe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     106339084
Messenger RNA biogenesis [BR:boe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     106339084
Chaperones and folding catalysts [BR:boe03110]
 Heat shock proteins
  HSP60 / Chaperonin
   106339084
Mitochondrial biogenesis [BR:boe03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    106339084
Exosome [BR:boe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106339084
  Exosomal proteins of other body fluids (saliva and urine)
   106339084
  Exosomal proteins of breast cancer cells
   106339084
  Exosomal proteins of colorectal cancer cells
   106339084
  Exosomal proteins of bladder cancer cells
   106339084
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 106339084
NCBI-ProteinID: XP_013633358
Position
C4:complement(47729949..47733686)
AA seq 582 aa
MYRLVSNIASQARNARKCTTQFGSMLSSTRSYSQKDIRSGVKELADTGQVTMGPKGCNVT
IEQKDDGSITITQSWRAPKVTKDDVTVAKSNESKGRVKNVGASPVKQVAKATNNVAGDGT
TYATVLTRAIFTEACKSVTAGKSAYHAAYRAMHLRLGIKLAVDTVLKNLKSRARMISTFE
EIAQVGTASANGDREIGELIAKAMESVGKEGVITVQGGNTLFNELEVVEGMKIDRGYRSP
LFITNEKYQTCELEDPLILIHEKEITSPDSTSTVLESALRKQRSLLIIAEDLDSFSVAGL
VWKTPRSHHICAVKAPGFGENRRAYMHDLATLTGAQVITEERGMSLEKIELGMLGTCKKV
IVSKENTVFIGGAGDKKYIGERCEQIRSMVETSESGYDKDMLQDRLAKLSESVAVIKIGG
TSEREISEKIDRVNNALNATKAALEEGIVPGGGFALLYASKELEKKLSTNYIFQKIGVQI
IQNALKIPVYSIASNAGVDGKVIVDKLLESNNPDIGYDVAKGEYVDMVKSGIIDPVKMIR
TALVDAASVSLLLTTTEAVVTEIPTKEDAFPVMGGGYGCMGF
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgtatcgacttgtctccaacattgcttcacaagctagaaacgccagaaagtgtacaacc
cagtttggaagcatgctcagttccactagaagttattcacaaaaagacataaggtccggt
gttaaggagcttgctgatacaggtcaagtcactatgggacccaaggggtgtaatgtcacc
atcgaacaaaaagatgatggtagtatcaccatcacacaaagctggcgtgcaccaaaggtg
acaaaggatgatgttactgttgccaagagcaatgagtccaagggaagagtcaagaacgtt
ggtgccagtcctgtcaaacaggttgctaaagccacaaataatgtagctggtgatggaacg
acgtatgctacagtccttactagagctatcttcacggaagcttgtaaatcagttactgct
ggaaagagtgcatatcatgctgcatatcgtgcaatgcacctaagacttggtatcaagtta
gcagttgatactgttttgaagaacttgaagagtagagcacgcatgattagcactttcgaa
gaaattgcccaagttggaacagcatcagctaatggagatagagagattggtgaacttatt
gcaaaggctatggaaagtgtcggcaaagagggagtgatcacagttcaaggtggcaacact
ttgtttaacgagttggaagttgttgagggtatgaagattgacaggggatacagatcccca
ctcttcattacaaacgagaaataccaaacatgtgagctagaagatcctctcattctcatc
cacgagaaggaaattactagtcctgattctacgtctacagttttagagtcggctctcagg
aaacaaaggtcgctgctgatcattgcagaggatttggatagcttttctgttgctgggcta
gtttggaaaacgcctcgttctcaccatatctgtgctgtgaaggcccctggttttggagaa
aaccgtagggcttatatgcacgatctagctaccctcacaggagcccaggtaataacagaa
gagagaggtatgagtcttgagaaaatcgaactcggtatgcttggaacctgcaaaaaggta
attgtatccaaagaaaacactgtttttattggtggggctggtgacaagaaatatattgga
gaacgatgtgaacagatacgatccatggttgaaacgagtgagtctggctatgacaaggat
atgttacaagataggttggctaagctttctgagagtgttgctgtaataaagatcggagga
acgagtgagagagaaattagcgaaaagatagatagagtaaacaatgctctaaatgcaacc
aaagcagctttagaagaaggtattgttccaggcggtggttttgctcttctgtatgcgtca
aaagaacttgagaagaagctttccacaaattatatttttcaaaaaatcggtgtccaaatc
atccaaaacgctctcaagatacctgtttacagtattgcttccaacgctggagtcgacggt
aaagtcatcgttgacaagcttttggaatcaaataatcctgacatcggttatgatgttgct
aaaggagaatacgtggatatggtgaagtctggtattatcgaccctgtgaaaatgatcaga
accgcattggttgatgctgctagtgtctcgcttttgttgactacgacggaagcagttgtg
accgagattccaacaaaagaagatgcgtttcccgttatgggtggtggttatgggtgtatg
gggttctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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