KEGG   Brassica oleracea (wild cabbage): 106341404
Entry
106341404         CDS       T04124                                 
Name
(RefSeq) cell differentiation protein RCD1 homolog
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106341404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106341404
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     106341404
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 106341404
NCBI-ProteinID: XP_013635629
UniProt: A0A0D3BSU1
Position
C4:10886895..10890330
AA seq 313 aa
MANLPDSLYEDYSTSKLTLPSASSFAPTTTVVPFPDMDTIIQWINDLHNEIPFVSNSALQ
NLVTHRNTYEILPLLLWKSPCTMTMMLQEIVKIYPHISAPVHSQEGKPPRAYNILLLFQC
IAHYPETRGCFLKAEMPHYLFPLMDIDLTYKPLECLRLGALGVLAHMLKAPIDGAAVRFL
MDNGALRYCTKAIEIGSTESKTVSVFILNKILSTNEGLQYCCVLADRFFLIDGLLKKLLV
YLSSMTNPSPSLFNLIAGCYAKLSQKPRAREGLWRYPPVMLLNGTFASLLAEDPDAVNYR
KQLIRNMQSKAMK
NT seq 942 nt   +upstreamnt  +downstreamnt
atggcaaatctaccagattctctgtacgaggactacagtacaagcaagttgacattgcca
tctgcttcttcctttgctccaaccaccacagtcgtaccttttccggacatggacacaatt
atccagtggatcaatgatcttcataatgagattccatttgtctctaattccgcgctccaa
aacctcgtcactcataggaacacttatgaaatcttgccgctgctattatggaaatctcct
tgtacaatgaccatgatgttgcaggagatcgtgaaaatctacccacacatctcagctcca
gtacactctcaggaggggaagccacctcgagcgtacaatattctgcttttgttccagtgc
atagctcattatccggagacaagaggctgcttccttaaggctgagatgccacactactta
tttcctttgatggacattgatctcacctataagcctctcgaatgcctaaggcttggtgca
ttgggtgtccttgctcatatgttgaaggcgcctatagacggagctgctgttcgtttcctt
atggacaatggtgctttacgttattgcaccaaagctatcgagattggctctacagagtca
aagacagtttctgtgttcatattgaacaagattctgtcaactaatgaggggcttcagtac
tgctgcgtcttggctgatcgttttttcctcatagacggtctcctcaaaaagctgcttgtg
tatctttcttccatgaccaacccttctcctagcttgttcaatcttattgctggttgctac
gccaagctctcccagaagcccagggctcgtgaaggattatggcgttaccctcctgtcatg
ctgcttaacgggaccttcgccagtttacttgctgaggacccagacgctgttaactaccgt
aagcagctgattcggaacatgcaaagcaaagctatgaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system