KEGG   Brassica oleracea (wild cabbage): 106343980
Entry
106343980         CDS       T04124                                 
Name
(RefSeq) uncharacterized protein LOC106343980
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106343980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106343980
   03110 Chaperones and folding catalysts [BR:boe03110]
    106343980
   03029 Mitochondrial biogenesis [BR:boe03029]
    106343980
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:boe04147]
    106343980
Enzymes [BR:boe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     106343980
Messenger RNA biogenesis [BR:boe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     106343980
Chaperones and folding catalysts [BR:boe03110]
 Heat shock proteins
  HSP60 / Chaperonin
   106343980
Mitochondrial biogenesis [BR:boe03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    106343980
Exosome [BR:boe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106343980
  Exosomal proteins of other body fluids (saliva and urine)
   106343980
  Exosomal proteins of breast cancer cells
   106343980
  Exosomal proteins of colorectal cancer cells
   106343980
  Exosomal proteins of bladder cancer cells
   106343980
SSDB
Motif
Pfam: Cpn60_TCP1 APG6_N DUF3153
Other DBs
NCBI-GeneID: 106343980
NCBI-ProteinID: XP_013638800
Position
C5:complement(14188100..14192802)
AA seq 972 aa
MSLRGVCGVVASLGLCFFRVEHSKLKRSMDQILALKEKLQNAKLMGMQKEDEKLRRGMES
KFPSTNTLCNQLTETLQHLASQIQQAEKDKERFEFKFSTSAQAINSLKQQMKDLSVKLSA
SEENIKSREKELEELQLEKGQKENSYQNEQCRTASFSNEKDAMINNSDAAIAEAKLNIEN
LNFQIEKVRLELTSKEDEGKYLVGVKEKLEQENMNIQLSADNLSEYIEAMIRHCRDIIKD
DKVTETIARDDDDVHIYSSGEGDTSGDDDYDDDDEEERDVNSKKGIDDQCEERAWKRSAH
LRSVSSSSVGAKEDATDTDPEGYRGFVPCPERSDILEILAARPDNLANYTALPSTLPSRI
SLYYAEMCLSEERFELLKKSEPQGQIGVSDTSGRLYLFWTPRPLDRKHVFKKRQVERREV
VAGYIRDQLFHALCWAYSLCDMVSASLVLHGWEKEFIPLCPRYLCEKVRPDLYGKDLKRG
ADLSSSAAHSCYGLSLEDGLAYVQDAGIPKEKNPTFNCNFKRASDPEEDLYRITDVFKYE
TMEQALVRLKSHPVAAKLTLFEGWSSDRIYRGPSKKGAGYIGEHEVLMLDCVLMDGEMVV
RCKSSNGERIGVLGYIFVSLEVMFLLAGKDDSRFCFKEPQYLINGFFSIGMDTGPLGLQF
REKPNRKKRNLKKFKVVLEQITTDSESSELGMMRTEHGSMIAEAMSRVGRKETSTIVGDG
TTQEAVQKHLTQIKNLIEQAEQDYEKEKLSERIATLSGGVAVIQVGAQTETELKDKNLIE
QVEQDYEKEKLNARIAKLSGRVAVIQVGAQTEPELKEKKLRVEYALNAKKAAVEDGIVVG
GGCTLLCLASKVDTIKAALDDDEEKVGTDIVKRALSYPLNPVAKNAGVSGSIVSEKVLSN
ENVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVP
TGNPMDNSGNGY
NT seq 2919 nt   +upstreamnt  +downstreamnt
atgagcttaagaggtgtgtgtggtgttgttgctagcctaggattgtgcttcttcagagtc
gagcactctaagctgaaaagatcaatggatcaaatacttgctttaaaggagaaactgcag
aatgctaagctcatggggatgcaaaaggaggatgaaaagcttcggagagggatggagtcc
aaatttccttcgactaacactctgtgtaatcaacttactgagactctgcagcacttggct
tctcagattcaacaagcggagaaggataaggagcgttttgagttcaagttctctactagt
gcgcaagcaattaactctttgaagcagcaaatgaaagatctatctgtaaaactgagtgct
tctgaagaaaacatcaaaagccgagagaaggaactagaagagctacaactcgagaaagga
cagaaagaaaactcttaccaaaatgaacagtgtagaactgccagtttctcaaacgaaaaa
gatgctatgataaataattctgacgcagctatagccgaagcaaaactcaacattgagaat
ttgaacttccaaattgagaaggtgaggcttgagttaacatcaaaagaagatgaaggcaaa
taccttgttggcgtcaaggagaagcttgaacaagagaatatgaatattcagctgagtgct
gataatctttctgagtacattgaagccatgatcaggcattgcagggacattatcaaggac
gacaaggttactgaaaccatagccagagacgacgatgatgtgcacatctattcttctgga
gaaggagacacctccggggatgatgattacgatgatgatgatgaagaagagagggatgta
aacagcaagaaaggaatagacgaccagtgtgaagagcgtgcatggaaacgaagtgctcat
ctcagatcagtttcatcaagctctgttggggcaaaagaagatgcaaccgatactgatcca
gaaggatacagaggttttgtcccatgccccgaacgttctgatatactagagatacttgcc
gcccgtcccgacaatttagctaactatactgccctgccgtctaccctgccgtcccgaatt
tctctttactatgcagagatgtgtctcagtgaggagagatttgagctcctaaagaaatca
gaaccccaaggtcaaataggggtttctgatactagtggccgactgtatttgttctggacg
ccaaggcctctagatcgaaagcatgtattcaagaaaagacaagtggagaggcgggaagtg
gttgccggctacattcgagatcagttatttcatgctctgtgttgggcctattccttatgc
gacatggtaagtgcttctttggtgcttcacggttgggagaaggaatttataccgctgtgt
ccgagatacttgtgcgagaaggttcgtccggacctgtatggaaaagatttaaaaagaggt
gcagatttaagtagttccgcagcccatagttgctatggtctgtctttggaagacgggttg
gcgtatgtgcaggatgctggcatacccaaagagaagaatcctacctttaactgcaatttc
aaacgggcatctgatcccgaggaagatttgtaccgcatcaccgatgtctttaaatatgaa
acaatggaacaagccttggtgcgccttaagagtcatcctgttgctgcaaaactgacgtta
ttcgagggatggagcagtgacagaatatatcgaggccctagtaagaaaggcgctggatac
attggtgaacacgaggtgttgatgctcgactgtgtcctaatggatggtgaaatggttgta
cgttgcaaaagtagcaatggtgagcgtattggagttttgggatacatatttgtttccctt
gaagtgatgtttctccttgccggtaaagatgactccagattctgcttcaaagaacctcaa
tacctcatcaatggtttcttctccataggcatggatacaggtccgctgggattacagttc
agagagaagcccaaccgcaaaaagagaaacctcaagaagtttaaggttgtacttgaacag
ataacaactgatagtgagtcatcggaactagggatgatgagaacagaacatggaagtatg
attgctgaagcaatgagcagagttggaaggaaggagacttcgaccattgtgggtgatggg
accacacaggaagcagtgcaaaagcatcttacacagattaagaatcttattgagcaagcg
gagcaagattacgagaaggaaaaactgagtgagagaatagcaacgctttctggtggagtt
gctgtgattcaggtcggagcacaaacggagacagaactcaaagataagaatcttattgag
caagtggagcaagattatgagaaggaaaaattgaatgcgcgaattgcaaagctttctggt
cgagttgctgtgattcaggtcggagcacaaacggagccagagctcaaagagaaaaaactg
agagttgaatatgctcttaatgctaaaaaggctgctgttgaggacggtattgtcgttggt
ggtggttgtactctgctttgccttgcttccaaggttgataccattaaagccgcccttgac
gatgatgaagaaaaggtcggaacagacatcgtgaaaagagcacttagttaccctctaaac
ccggttgctaagaatgctggagtcagtggaagcatagttagcgagaaggtgctttccaac
gagaacgttaagttcggttacaatgctgcaactggcaagtacgaagatttgatggctgca
ggaatcatcgatccaacaaaggttgtgagatgttgcttggaacacgcagcttcggtggca
aagacattcttgatgtcagactgtgttgttgttgagatcaaggaacctgagccagttccc
acaggcaacccaatggacaactcaggaaatggatactga

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