KEGG   Brassica oleracea (wild cabbage): 106344305
Entry
106344305         CDS       T04124                                 
Name
(RefSeq) ABC transporter B family member 10
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:boe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    106344305
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:boe02000]
    106344305
   04147 Exosome [BR:boe04147]
    106344305
   04090 CD molecules [BR:boe04090]
    106344305
Enzymes [BR:boe01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     106344305
Transporters [BR:boe02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    106344305
Exosome [BR:boe04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   106344305
CD molecules [BR:boe04090]
 Proteins
  106344305
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N Zeta_toxin AAA_16 ABC_ATPase AAA_29 AAA_22 DUF87 AAA_21 RsgA_GTPase AAA_15 APS_kinase AAA_25 AAA_30 AAA_19 nSTAND1 AAA_28 DUF2714
Other DBs
NCBI-GeneID: 106344305
NCBI-ProteinID: XP_013639162
Position
C5:complement(4391298..4401764)
AA seq 1225 aa
MQPSDVSATVAEKKEKEKKRPSVSVFKLFSFADFYDCVLMTLGSIGACIHGASVPVFFIF
FGKLINIIGLAYLFPQEASHKVAKYSLDFVYLSVAILFSSWLEVACWMHTGERQAAKIRK
AYLRSMLSQDTSLFDTESSTGEVISAITSDILVVQDALSEKVGNFLHCMSRFTAGFAIGF
ASVWQISLVTLSIVPLIAVAGGIYAYVSTGFLSSVRKSYVKAGEIAEEVIGNVRTVQAFT
GEEKAVKSYGEALENTYTYGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSIIVHKGIANG
GESFTTMLNVVIAGLSLGQAAPDISTFVRARAAAYPIFQMIERNKEVKTGRILGKVEGEI
QFRDVTFTYPSRPDVVIFDKLNLVIPAGKVVALVGGSGSGKSTVISMIERFYEPTDGVVL
LDGNDIRYLDLKWLRGHIGLVNQEPALFATTIRENIMYGKDDATDEEITRAVTLSEAISS
INKLPDGLETQVGERGVQLSGGQKQRITISRAILKNPSILLLDEATSALDAESEKSVQKA
LDKVMVGRTTVVVAHRLSTVRNADIIAVVHGGNIIESGSHDELISNPDGAYSSLLRIQEA
ANPNLNHTPNLPVSKEPLPERPITKTDLCSMDQSGNQQDTTRNGKVTLGRLYSMIRPDWK
YGLLGLFGSLVAGSQMPLFALGISQALVSYYMDWETTQKEVKRISILFCCASVITVISHA
IEHATFGIMGERLTLRVRQMMFSAILRNEIGWFDKVDNTSSMLASQLESDSTLLRTIVVD
RSTILLENFGLVVTSFIISFILNWRLTLVVLATYPLIISGHISEKLFMQGYGVNLNKAYL
KANMLAGEAISNIRTVAAFCAEDKVLELYSNELLEPSERSFRRGQTAGILYGVSQFFIFS
SYGLALWYGSVLMGQGLSSFESVMKTFMVLIVTALVMGEVLALAPDILKGNQMVASVFEL
LDRRSQVVGDKGEELSNVEGTIELKGVHFSYPSRPDVTIFRDFDLTVPYGKSMALVGQSG
SGKSSVLSLILRFYDPTAGTIMIDGHDIKTLKLKSLRRHVGLVQQEPALFATTIYENILY
GKEGALESEVMEAAKLANAHDFICSLPEGYSTQVGERGIQMSGGQRQRIAIARAVLKNPA
ILLLDEATSALDVESERVVQQALDRLMSNRTTVVVAHRLSTIKNSDMISVIQEGKIIEQG
SHNSLIENENGPYSRLINLQQHQLS
NT seq 3678 nt   +upstreamnt  +downstreamnt
atgcagccgtccgacgtttcggcaactgtggccgagaagaaagagaaggagaaaaagcgg
ccaagtgtatcagtgttcaagcttttttcctttgctgatttctacgattgcgttttgatg
actcttggatccattggtgcgtgcattcacggtgcctccgttccagttttcttcattttc
ttcggcaaacttatcaacatcatcggtcttgcttacctcttcccccaagaagcttctcac
aaagtagccaagtactcgctggattttgtatatctgagtgtggcaatactcttctcatca
tggttagaggttgcatgttggatgcatacgggagaaagacaagctgcaaaaataagaaaa
gcatatcttcggtctatgttaagtcaagacacaagcttattcgacaccgaatcttccacc
ggagaagtcatctccgccatcacttccgacatacttgtcgtccaagacgctctatccgaa
aaggtaggaaattttctgcattgcatgagccggtttacagctggttttgcaatcggattc
gcgagcgtatggcaaataagtctcgtcactctctccatagtcccactcattgcggtcgcc
ggtggcatctacgcttatgtcagcaccggattcctctccagtgtccgaaaatcatacgtc
aaagccggcgagattgcggaagaggtgatcgggaatgtgaggaccgtacaagcattcaca
ggagaagaaaaggcggtgaaatcatacggagaagcactggagaatacgtacacgtacggg
agaaaagccggtttagctaaaggactaggactcggttcaatgcactgtgttctgtttttg
tcgtgggctttgcttgtttggttcacaagcatcattgttcacaaggggattgctaatggc
ggcgagtctttcaccaccatgctcaacgttgtcatcgctggcttgtctcttggccaggca
gcgccagacatctccacatttgtacgagcgagagctgctgcgtatcctatctttcagatg
attgaacggaacaaggaggtgaaaacaggtcgtatactcgggaaagtagaaggagagatt
caattcagggacgtgactttcacatacccgtctcgtcctgacgtggtgatctttgacaag
ctaaacctagtgatccctgctgggaaagtcgtggcccttgttggaggaagcgggtctgga
aaaagcacggtgatatctatgatcgagaggttctacgagcctaccgatggggtggtgttg
cttgacgggaacgatattagataccttgaccttaagtggctaaggggacatattggtctg
gttaatcaagagcctgccctgtttgcaaccacgattcgtgagaacatcatgtatggtaaa
gatgacgcgacggatgaggaaatcacccgtgctgtaacgctctcggaagccatttcatct
atcaataagctcccagatggattggaaacacaggttggcgagagaggggttcagctatca
ggtgggcagaagcagaggatcacgatctcgagagccatcttgaagaacccatcaatactc
ttactagacgaagcaacaagcgcactagacgcagagtcagagaaaagcgtgcaaaaagct
ttggacaaagtgatggtcgggagaacgacggttgtggtggctcatagactctccaccgta
agaaacgctgatatcatagccgttgttcacggaggaaacatcattgaatccggaagccac
gatgaactcatctctaacccggatggagcttactcttctctcttacgtatccaagaagct
gcaaaccctaacttaaaccacactccaaacttaccagtcagtaaagaacccttgccggaa
cgaccgataacaaagacggacttgtgttccatggatcaatcaggaaaccaacaagacact
accagaaatggcaaagtaacattgggacgtctctattctatgatacgtcctgactggaag
tatggactcttagggttgtttggttctttagtggccggttctcaaatgccgctattcgca
cttgggatctctcaggctttagtttcttattacatggactgggaaacaactcaaaaagag
gtcaagaggatctctatcctcttctgttgtgcctcggttattaccgtcatctcgcacgcc
attgagcatgccacctttggtatcatgggtgagcgtttgactctccgcgtccgccaaatg
atgttttcagcgatcctgaggaatgaaattggatggtttgataaagtggataacactagc
tcaatgttagcgtcgcagcttgaaagcgacagcactttgcttagaacgatcgtggtcgat
aggtcgacgattctattggagaattttggactagttgtgacatctttcatcatctctttt
atactaaactggcgcctcactcttgttgtcttggcaacatatccattgatcatcagcgga
catattagtgagaaacttttcatgcaaggctatggagtaaacttgaataaagcgtattta
aaggctaacatgttggccggagaggctattagcaacattcgaaccgttgctgccttttgt
gccgaggataaggttcttgaactttattccaacgagcttctagaaccttctgaacgttct
tttaggcgtggacagacggctggcattttgtacggcgtgtctcagttcttcatcttctcc
tcctacggccttgccctctggtacggatcggttttgatggggcaaggattatcaagtttc
gagtctgtgatgaaaacattcatggttttgatagttacagctttagtgatgggtgaagtg
ttggctctagcccctgatatacttaaaggaaaccagatggttgcttcggttttcgagcta
ttggaccgaagaagtcaagtcgttggagataaaggcgaggagctgagtaatgtggaaggt
actattgagctcaaaggtgtccatttcagctacccttcacggcctgatgtgactatcttc
cgcgatttcgacctaactgttccttatgggaaaagcatggcgctcgtgggacaaagcggg
tccgggaagagttcggtcctttcgcttattcttcggttctatgatcctacagccggtaca
atcatgatagacggacacgacatcaagactctgaaactgaaatcgctgcgaagacacgtc
ggtctggttcaacaagaaccggctctttttgcgacaactatctacgagaacatcttgtac
ggaaaagaaggagcactggagtctgaagtcatggaagcagctaagcttgcaaacgctcac
gacttcatctgctctctcccggaaggctactcaactcaagttggtgaacgtggcattcag
atgtcaggcggccagagacaaaggatcgctatcgctagagccgtcctcaagaatccagca
attctgctacttgacgaagctacaagcgccttggacgttgaatcagagcgtgtggtacaa
caagcattggataggctaatgagtaatcggaccacggttgtagtggctcacaggctatcg
acgatcaagaactcagatatgataagtgttatacaagaaggtaagatcatagagcaaggc
agccacaatagcctcattgagaatgagaatggtccttactctagacttatcaatctccag
cagcatcaactatcctga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (33)   

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