KEGG   Bos mutus (wild yak): 102269236
Entry
102269236         CDS       T02919                                 
Symbol
PABPC4L
Name
(RefSeq) poly(A) binding protein cytoplasmic 4 like
  KO
K13126  polyadenylate-binding protein
Organism
bom  Bos mutus (wild yak)
Pathway
bom03015  mRNA surveillance pathway
bom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bom00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102269236 (PABPC4L)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102269236 (PABPC4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bom03019]
    102269236 (PABPC4L)
   03041 Spliceosome [BR:bom03041]
    102269236 (PABPC4L)
Messenger RNA biogenesis [BR:bom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     102269236 (PABPC4L)
   mRNA cycle factors
    Stress granule specific factors
     102269236 (PABPC4L)
Spliceosome [BR:bom03041]
 Complex C
  Other components
   Complex C specific factors
    102269236 (PABPC4L)
SSDB
Motif
Pfam: RRM_1 RRM_5 Nup35_RRM RRM_7 RRM_occluded MARF1_RRM1 DUF4523 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 102269236
NCBI-ProteinID: XP_014338198
Position
Un
AA seq 388 aa
MNIAAKYRQASLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLQ
LADAQKALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSA
FGKILSSKVMSDDHGSRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKSRKDREA
EFQNKAHEFTNVYIKNFGDEMDDERLNEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCQGAKLYIKNL
DETIDDEKLRREFSSFGSISRVKVMQEEGRSKGFGLICFSSAEEATKAMTEMNGRILGSK
PLNIALAQKPXERKTFCISQCVLQTKKC
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaatatagcagccaagtaccgccaggcctccctgtacgtaggtgacctccatgcggat
gtcaccgaggacctgctgttcaagaagttcagcgccgtgggccccgtgttgtccatccgc
atctgcagggacctggtcacccgccgctccctgggctacgcctatgtgaactttctgcag
ctggcggatgcccaaaaggccctggacaccatgaactttgacctgataaagggcaaatcc
atccgtctcatgtggtctcaacgtgacgcctacttaaggaaatctggaattgggaacgtg
ttcatcaagaatctggacagatccattgataacaaaaccctttatgaacacttttcagcg
tttgggaagatcctgtcctccaaggtgatgagtgatgatcacggctcccggggctatgca
ttcgtgcactttcaaaaccagattgctgcagacagggccatcgaggagatgaatggggca
ctgcttaaggactgcaggctgtttgttggcagattcaaaagccgcaaagatcgagaagcc
gagtttcaaaacaaagcccatgaattcaccaatgtttacatcaaaaatttcggagatgag
atggatgatgagagactaaacgaagttttcagcaagtacggcaaaaccctgagtgttaag
gttatgacagattccagtggaaaatccaaaggctttggctttgtgagttttgatagccac
gaggctgccaaaagggctgttgaagaaatgaatggaaaggacataaacggacagctgctt
tttgtaggccgggcacagaagaaagcagagcgacaggctgagttaaagcaaatgtttgag
cagctgaaacatgaaagatttcggcggtgccagggtgcgaagctctatattaagaacctg
gatgagaccattgatgatgaaaaactgcggagggaattttcttcatttggatcaattagc
agggttaaggtaatgcaggaagaagggcgaagcaaagggtttggcttgatctgcttctcc
tctgcggaggaggccactaaagcaatgacggagatgaatggccgcatcttaggctccaag
ccactcaacatcgccctggcccagaaaccctaggagaggaaaactttctgcatcagccag
tgtgtgctgcagactaagaaatgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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