KEGG   Bos mutus (wild yak): 102272509
Entry
102272509         CDS       T02919                                 
Symbol
LTN1
Name
(RefSeq) listerin E3 ubiquitin protein ligase 1
  KO
K22377  E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
Organism
bom  Bos mutus (wild yak)
Brite
KEGG Orthology (KO) [BR:bom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bom03009]
    102272509 (LTN1)
   04121 Ubiquitin system [BR:bom04121]
    102272509 (LTN1)
Enzymes [BR:bom01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102272509 (LTN1)
Ribosome biogenesis [BR:bom03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    102272509 (LTN1)
Ubiquitin system [BR:bom04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102272509 (LTN1)
SSDB
Motif
Pfam: zf-RING_2 zf-ANAPC11 FANCL_C zf-rbx1 RINGv HipN zf-RING-like zf-RING_16
Other DBs
NCBI-GeneID: 102272509
NCBI-ProteinID: XP_005907882
Position
Un
AA seq 1813 aa
MGGVGGGRGGPGGGGPVSPFPVPGAGSCGPAVSTRGLRAGSAAETATMGGKNKQRTKGNL
RPSNSGRAAELLAKEQGTVPGFIGFGTFHSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLS
KKDVTTKLKAMQEFGTMCTERDTEIVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLI
LKVKKHLAPYLKSLMGYWLMAQCDTYTPAASAAKDAFEAAFPPSKQPEAIAFCKDEITSV
LQDHLIKETPDTLSDPQTVPEEERDAKFYRVVTCSLLALKKLLCLLPDNELDSLEEKFKS
LLSQNKFWKYGKHSIPQIRSAYFELVSALCQRIPQLMKDEASKVSPSVLLSIDDSDPIVC
PALWEAVLYTLTTVEDCWLHVNAKKSVFPKLSAVVREGGRGLATVIYPYLLPFISKLPQS
ITDPKLDFFKNFLTSLVAGLSTEKTKTSFSECSAVISAFFECLRFIMQQNLGEEEIEEML
VNDQLIPFIDAVLKDPKLQDGQLFNHLAETLSSWEARADLEKDDKTARNLEKVLLNFWEK
LSEICVEKINEPEADVKSVLGVSNLLQVLQKPKSSLKLNKKKAGKVRFADEMPENNKENE
KCVSSEGENSEGSELMAEPSVSPSCSDLISPLRKKPLEDLVCKLAEMSINYVNEQKSEQH
LRFLSTLLNSFSSTQVFKVLLGDEKQSTVKGKPLEIAKLVQKNPAVQFLYQKITGWLNED
QRKDAGFLVDILYSALCCCDSNVERKAILDDLIEVELKWNSILQIIEKACCSSDNHALVT
PWLKGDILGEKLVTLAEHLCNKDLESTVSSEPYFSERWTLLSMVLSQHVKNDYLIGEVYV
ERIIVKLHETLSKAKKLSEAENNDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQL
CAESKEKTHLPDFIISKLKNTWLSGVNLLVHRTGDTFKQSTFLCLSALWLKNQVQSSTLD
VTSLQVLLSAVDDLLNALLESKDANLLGTYIGSVMPDNSEWERMRQSLPVQWLHRPLLEG
RLSLNYEGFKTDFKEQDTKKLPSHLCTSALLSKMIVVALKKETVLENNELDKIIAELLYS
LQWYEELDNPPIFLTGFCEMLQKMNITYDNLRGLGNTSGLLQLLFDRSRKNGTLWSLIIA
KLILSRSVSSDEVKQHYRRKEGFFPLTEGNMHTIQSLCPFLSKEDKKEFIAQCIPALLAW
TKEDVCHINGGFGHLAIFNSCLQTKSIDDGELLHGLLKVLITWKKDHEDIFLFSCNLSEV
SPEILAVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTNENQALYSVPLVQLF
AYVSCDLACELSAFFDSTTLVTTGSLPVNLISEWKEFFSPGIHSLLLPLLVTATGENRDT
SETSFQNAMLKPMCETLTYIPKDQLLSQKLPARLIAGQKTNLPEYLQTLLNTLAPLLLYR
ARPVQIAVYHMLYKLMPEFPQYDQDNLKSYGDEEEEPALSPPAALMSLLSTQEDLLENVL
GCIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRRTKSLNKLL
YHLFRLMPENPAFAETAVELSNKDPRTFFTEELHLGIRDTSALPYHIPHLACSVYHMTLK
DLPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSSQEISSVQTSTQLFNGMTVKARATTR
EVMATYSIEDIVIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWMLQLSTYLTHQNGS
IMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSS
NKSTCPLCRETFF
NT seq 5442 nt   +upstreamnt  +downstreamnt
atgggcggggtgggtggcggaaggggcgggccgggggggggtggtcctgtgagccccttt
ccggtgccaggggccggaagttgtggcccggctgtgtcaacccgggggctgcgggctggg
agtgcggctgagaccgcgaccatgggcgggaagaacaagcagaggaccaaggggaatctg
aggccttcaaacagtggccgagctgcagaactccttgccaaggaacagggaacagtgcct
ggatttattggttttggaacatttcacagtgacctaggctatgttcctgctattcaagga
gctgaagaaatagacagtcttgtggattctgatttccgaatggtgctgcggaaactttct
aagaaagatgtcacaacaaaactaaaagctatgcaggaatttggaaccatgtgtacagag
agagacacagaaattgtaaaaggagttcttccatactggccaagaattttctgcaaaatt
tcacttgatcatgaccgccgggttcgagaagccacacagcaagcttttgaaaaacttatc
cttaaagtaaagaaacacttggctccttatttaaaaagtttaatgggttattggctgatg
gctcagtgtgatacttacacaccagctgcctctgcagcaaaagatgcctttgaagcagct
ttccctccgagcaagcaacctgaagccatagcattttgtaaggatgaaatcacaagtgtg
ctacaggatcatcttatcaaagaaacacctgataccctcagtgacccacaaactgttcca
gaggaagagagagacgctaaattctatcgagtcgtaacttgttccttattggcattaaag
aaattgctttgcctgttacctgataatgagcttgactctctggaggagaagtttaagtct
cttttatcacagaataagttttggaagtatggaaaacacagtatacctcagatccgctca
gcctattttgagttggtttctgctttgtgccagcgtattccacagttgatgaaagatgaa
gcatccaaagtgagcccgtccgttcttcttagcatcgatgacagtgaccccattgtatgc
ccagctctctgggaagctgtactttatacacttacaactgtggaggactgttggcttcat
gtaaatgcaaaaaaaagtgtgtttcccaagctgtcagctgtggttcgtgaaggaggtcgg
ggtctggctactgtcatatatccttatcttctgcccttcatcagcaaactccctcagtcc
attacagatccaaagttggatttcttcaagaattttctcacctccctagttgcagggcta
tcaacagaaaaaaccaaaaccagcttttcagagtgctcagcagtgatatctgcttttttt
gaatgcttacgttttataatgcaacaaaacttaggggaggaagagatagaagagatgctc
gtcaatgatcagttgattccttttattgatgcagttctcaaagaccccaagttgcaagat
gggcagctatttaaccatttggcagaaactttaagttcctgggaagccagagccgatttg
gaaaaagatgataaaacagctcgcaacttggagaaagtgctgctgaatttctgggaaaaa
ctatcagagatctgtgttgagaaaatcaatgagccagaagccgatgttaagtcagttttg
ggtgtttctaacctattgcaggtccttcaaaagccgaagagctccttgaaattgaataaa
aaaaaagctggtaaggttagatttgctgatgagatgcctgaaaataataaggagaatgaa
aaatgtgtctcctcagagggagagaacagtgaaggctctgagttaatggctgaaccttct
gtctctccgagttgctccgaccttatatccccgctgaggaaaaaacctttggaagactta
gtctgtaaactggcagagatgagcattaattacgtcaatgaacaaaagtcagagcaacat
ctcaggtttctttccaccctgctcaactcattctcatcaacccaagtgtttaaagtgctg
ctaggtgatgaaaaacagagcactgtcaaaggcaagcctcttgaaatagccaaacttgta
caaaaaaatcccgcggtacaatttctataccagaaaataacaggttggctaaatgaagat
caaaggaaggatgccggtttcttggtggacattctgtacagtgccctctgttgctgtgat
agtaatgtggaaagaaaagctattctggatgatcttattgaggtagagctgaaatggaac
tctattcttcagatcattgaaaaggcatgctgtagttcagataatcatgctttagtaaca
ccttggctcaaaggagatatccttggagagaaattggtaaccttggcagagcatctttgt
aacaaagacttggaatccacagtatcttctgaaccttacttctcagaaagatggactctt
ttaagcatggtgttatcccaacatgttaaaaacgattacttgattggagaagtttatgtt
gaaagaattattgttaaacttcatgaaactttatccaaagcaaagaaattgtcagaagct
gaaaataatgactcatcagtgtcttttatctgtgatgtggcctataactatttcagctca
gcgaaaggatgcttgctaatgccatcatctgaagatttattattaactctctttcagtta
tgtgctgagagcaaagaaaaaacacatttgccagactttatcatcagtaaactgaaaaat
acttggctctctggtgtgaatttattggttcatcgaactggtgacacatttaaacagagc
accttcctatgtttatctgctctgtggctgaagaaccaagttcagtcttcgactttggat
gtcacaagtcttcaggtgcttttgtctgctgttgatgatttgctaaatgcgcttctagag
agtaaagatgctaatctcctgggaacttatattggaagcgtaatgccagacaacagtgaa
tgggaaagaatgagacagtctcttcccgtacagtggttgcataggcctcttttagaagga
agattgagtttgaattatgagggtttcaaaacagattttaaagagcaagatacaaagaaa
cttcccagccatttgtgtacttcagcattattgagtaaaatgatagtagttgcactgaaa
aaggaaacagtcctagaaaataatgaacttgacaaaataattgcagaactgctctattca
ttgcagtggtatgaagaattagacaatccacctattttcctaactggattttgtgaaatg
cttcagaaaatgaatatcacgtatgataacttacgtggacttggtaatacttccggcctt
ctgcagctgttatttgacagatccaggaaaaacggcaccctttggtctcttattattgct
aagttgatcctttcccgaagtgtttcatctgatgaagtaaaacagcattataggagaaaa
gaaggtttttttccactaacagaaggcaatatgcatactattcaaagtctctgtccattt
ttgtcaaaagaagacaagaaagaattcattgctcagtgtatacctgcccttttggcctgg
accaaggaagatgtttgccatattaatggaggttttggacatcttgccattttcaattct
tgtctgcagaccaaaagcatagatgatggagagctattacatggtctattaaaagttctg
ataacgtggaaaaaagatcacgaagatatttttcttttcagttgtaatctgtcagaagta
agtccagagatactggctgtaaatatagaaataatccgtttcctttccctgtttctgaaa
tactgctcatctcctttggcagagagcgaatgggacttcatcatgtgttccatgttggct
tggttggagacaacaaatgagaatcaggcactgtattctgttccacttgtacaactgttt
gcctatgtcagctgtgatttggcctgtgaactcagcgcgttttttgattctacaactctg
gtcaccactggcagccttcctgtaaatctgatcagtgaatggaaagaatttttttctcct
ggcatccacagtttgcttttacctcttttggtgactgctacaggagaaaacagagataca
tctgaaacatcatttcagaatgcaatgctgaagcccatgtgtgaaacattaacttatatc
ccaaaggatcagctattgagtcagaaactccctgcaagattgattgctggtcagaaaaca
aacttgccagaatacctccagactttgttaaatacattagccccattactcctttataga
gctcggcctgtgcaaattgctgtctatcatatgctatacaaattgatgcctgaattccca
caatatgatcaagataatctaaagtcatatggagatgaagaagaagaaccagccttgtcg
ccaccggctgcactgatgtctcttcttagcactcaagaggacttactagaaaatgttttg
ggatgtattcctgttggacagatagttactatcaagccactgagtgaagacttctgttat
gttctggggtacctcctcacttggaaattaatacttactttcttcaaagctgcttcatct
cagcttcgagctctgtattcaatgtaccttcgaagaacaaaaagtttgaataaattgctt
tatcacctgttcaggcttatgccagaaaatccagcctttgcagagacagctgttgagctc
tccaataaggaccctcgaactttctttacagaagagctccatttgggtattagagatacc
tcagctcttccctaccatattccacacttggcttgttcagtctatcacatgacattaaaa
gacttgccagccatggtcaggctgtggtggaacagtagtgagaagcgtgtgttcaatatc
gtagatagattcaccagcaagtatgttagcagtgttctttcttctcaagaaatatcttct
gtgcaaacaagtacacagctgtttaatggcatgacggttaaagctcgagctactactcga
gaagtcatggccacttacagtattgaggatatagtgattgaacttataatacagctgcct
tcaaattatccattgggctcaataacagtggaaagtgggaaaagagttggagtggccgtg
cagcagtggcgaaactggatgcttcagctgagcacttatctcacccatcaaaatggaagt
attatggaaggcttagcattgtggaaaaataatgtagacaaacgttttgagggtgttgaa
gattgcatgatttgtttctcagtcattcacggtttcaactattctcttcccaaaaaagcc
tgtagaacatgcaaaaaaaagttccattcagcttgtttgtacaaatggtttacatccagc
aacaaatccacttgtccactctgtcgcgagacctttttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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