KEGG   Bos mutus (wild yak): 102280323
Entry
102280323         CDS       T02919                                 
Symbol
COL6A1
Name
(RefSeq) collagen type VI alpha 1 chain
  KO
K06238  collagen type VI alpha
Organism
bom  Bos mutus (wild yak)
Pathway
bom04151  PI3K-Akt signaling pathway
bom04510  Focal adhesion
bom04512  ECM-receptor interaction
bom04820  Cytoskeleton in muscle cells
bom04974  Protein digestion and absorption
bom05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:bom00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102280323 (COL6A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102280323 (COL6A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102280323 (COL6A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102280323 (COL6A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102280323 (COL6A1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102280323 (COL6A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bom04147]
    102280323 (COL6A1)
   00536 Glycosaminoglycan binding proteins [BR:bom00536]
    102280323 (COL6A1)
Exosome [BR:bom04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102280323 (COL6A1)
Glycosaminoglycan binding proteins [BR:bom00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102280323 (COL6A1)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   102280323 (COL6A1)
SSDB
Motif
Pfam: VWA Collagen VWA_2 VWA_3 VWA_CoxE DUF1194
Other DBs
NCBI-GeneID: 102280323
NCBI-ProteinID: XP_014335789
Position
Un
AA seq 1022 aa
MRLPRALLPLLLQACWASAQDDPVASRAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKSFTKRFIDNLNDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDELKSSVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLVVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEVISQTIDTITDMIK
NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM
KGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMKGETGFPGLPGCKGSPGFDGIQGLPGP
KGDPGAFGLKGQKGEPGADGEPGRPGSTGPPGDEGEPGEPGPPGEKGEAGDEGNAGPDGA
PGERGGPGERGPRGTPGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGD
EGPPGTEGPKGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK
GYPGLKGDEGEAGDPGEDNNDIAPRGAKGAKGYRGPEGPQGPPGHVGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFIVKVIDRLSKDELVKFEPGQSHA
GVVQYSHNQMQEHVDLRDPNIRNEAIKKLQWMGGGTFTGEALQYTRSRLLPPTPNNRIAL
VITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDVFGLAAGSDQLNVISCQGLAPQGRPGI
SLVKENYAELLDDGFLKNITAQICIDKKCPDYSCPITFSSPADITILLDGSASVGSHNFD
ITKRFAKRLAERFLTASRTDPSQDVRVAVVQYSGTGQQRPERAALQFLQNYTVLANTVDS
MDFFNDATDVMDALGYVTRFYREASSNAAKKRLLLFSDGNSQGATPAAIEKAVQEAQRAG
VEIFAVVVGRQVNEPHVRVLVTGKAAEYDVVFGERHLFRVPSYQALLRGVFYQTVSRKVA
LD
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgaggctgccccgcgctctgctccccctgctgctgcaggcctgctgggcctccgcgcag
gacgaccccgtggcctcaagggccatcgccttccaagactgccctgtggacctgttcttt
gtgctggacacctccgagagcgtggccttgaggctgaagccctatggggccctggtggac
aaggtcaagtccttcaccaagcgcttcattgacaacctgaacgacaggtactaccgctgt
gaccgcaacctggtgtggaatgcgggcgcgctgcactatagtgacgaggtggagatcatc
cgcgggctcacgcgcatgcccagcggccgcgacgagcttaagagcagcgtggacgccgtc
aagtacttcggaaagggcacctataccgactgcgccatcaagaagggtctggaggagctg
ctcgtggggggctcccacctaaaggagaacaagtacttggttgtggtgactgacgggcac
cccctggagggctacaaggagccctgcgggggcctggaggatgctgtgaacgaggccaag
catctgggcatcaaagtcttctccgtggccatcacgcccgaccacctggagccacgtctg
agcatcatcgccacggaccacacataccggcgcaacttcacggcggctgactgggggcag
agccgcgacgccgaggaagtcatcagccagaccatcgacaccatcaccgacatgatcaaa
aataatgtggagcaagtgtgctgctccttcgagtgccagcctgccagaggaccccccggg
cctcgaggcgaccccgggtacgagggagaaagagggaagccggggctcccgggagagaaa
ggagaagctggagaccctggaagacctggggaccttggacccgtcggctaccagggcatg
aagggagaaaaagggagccgaggggagaagggctccaggggacccaaaggctacaagggc
gagaagggaaagcgtggcatggacggcgtggatggcatgaagggggagacagggttccct
ggcctgccaggctgcaagggctcacccggattcgatggtatccaaggactccccgggccc
aagggtgacccaggtgccttcggactgaaaggacagaagggtgagcccggagcagacggg
gagcctgggaggcccgggagcacggggccgcctggagatgagggtgagcctggagagcct
ggtcccccgggagagaagggagaagccggcgatgagggaaatgcaggaccagacggagcc
cccggagagaggggcggccctggggaaagaggacctcgagggaccccaggtgcgcggggc
cctagaggagacccgggtgaagctggaccccaaggtgaccagggacgagaaggccccgtc
ggtgtccccggtgacccgggcgaggctggccccattgggccgaaaggataccgaggtgat
gagggaccccctgggaccgagggccccaaaggagctccggggcctgcaggcccccccgga
gaccccgggctgatgggtgagaggggtgaagacggcccccccgggaatggcaccgaaggc
ttccccggctttcctggctatccaggcagcagaggccctcctgggataaacggcaccaaa
ggctaccctggcctcaagggggacgagggagaagccggggaccccggagaggacaataat
gacattgctccacgaggcgccaaaggagcaaagggctaccgaggtcctgaaggcccccag
ggacccccaggacacgtgggaccaccggggccagacgaatgcgagattttggacatcatc
atgaaaatgtgctcttgctgtgagtgcaagtgcgggcccatcgacatcctcttcgtgctg
gacagctccgagagcatcggcctacagaacttcgagatcgccaaggacttcatcgtcaag
gtcattgaccggctgagcaaggatgagctggtcaagtttgagcctgggcagtcacatgca
ggtgtggtgcagtacagccacaaccagatgcaggagcatgtggacctgagggaccccaac
atcaggaatgaggccatcaagaagctgcagtggatgggcggcggcaccttcacgggcgag
gccctgcagtacacccggagccggctgctgccacccactccgaacaaccgcattgccctg
gtcatcaccgatggccgctcagacacccagagggacaccaccccactcagcgtgctctgc
ggccctgacatccaggtggtctccgtgggcatcaaggatgtctttggcttggccgcgggc
tccgaccagctcaacgtcatctcctgccaaggcctggcaccccagggacggccgggcatc
tcactggtcaaggaaaactacgccgagcttctggacgatggcttcctgaagaacatcact
gcccagatctgcatagacaagaaatgtccagattacagctgcccaatcaccttctcctcc
ccggccgacatcaccatcctcctggacggctccgccagcgtgggcagccacaactttgac
atcaccaaacgctttgccaagcggctggcagagcgcttcctgacagcgagccggacagac
ccgagccaggacgtgcgtgtggcagtggtgcagtacagcggcacggggcagcagcggccg
gagcgcgcggccctgcagttcctgcagaactacaccgtgctggccaacaccgtggactcc
atggacttcttcaatgacgccaccgacgtcatggacgccctgggctacgtgacccgcttc
taccgcgaggcctcgtccaacgccgccaagaagaggctgctgctcttctcggatggcaac
tcgcaaggcgccacgccggccgccatcgagaaggcggtgcaggaggcccagcgggcgggc
gtggagatcttcgcggtggtggtgggccgccaggtgaacgagccccacgtgcgtgtcctg
gtcaccggcaaggcggctgagtatgacgtggtcttcggcgagcgccacctgttccgcgtg
cccagttaccaggcgttgctgcggggcgtcttctaccagacggtgtccaggaaggtggcg
ctggactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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