KEGG   Bosea sp. PAMC 26642: AXW83_08660
Entry
AXW83_08660       CDS       T04264                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bop  Bosea sp. PAMC 26642
Pathway
bop03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AXW83_08660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bop03021]
    AXW83_08660
   03400 DNA repair and recombination proteins [BR:bop03400]
    AXW83_08660
Enzymes [BR:bop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AXW83_08660
Transcription machinery [BR:bop03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AXW83_08660
DNA repair and recombination proteins [BR:bop03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AXW83_08660
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 DOCK-C2
Other DBs
NCBI-ProteinID: AMJ60353
UniProt: A0A126NUT4
Position
complement(1833860..1838011)
AA seq 1383 aa
MVNSLQGRRRVRKFFGKLKEVAQMPNLIEVQKASYDQFLMVEEPKGGRGDEGLQSVFRSV
FPIGDFSGASLLEFVKYTFEPPKYDVDECRQRGMTFSAPLKVTLRLIVFDIDPDTQAKSV
KDIKEQDVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAA
RIIPYRGSWLDIEFDAKDIVYARIDRKRKIPVTSLLFALGMDGEEILSRFYAHITYVRDG
KGWRVPYDAERMKGFKATVDLIDADTGEVVVEAGKKLVARTARQLAEKGLKFLRATDEDL
VGQYIAEDIVDPETGEVHAEAGEELTMAAEAKTGDIKGNLVDLIAKGYDEITVLDIDHIT
VGPYIRNTLTVDKNSRREEALFDIYRVMRPGEPPTLETAENMFQSLFFDSERYDLSAVGR
VKMNMRLDLDAEDTVRILRKEDIFAVVKALVDLRDGKGEIDDIDHLGNRRVRSVGELMEN
QYRLGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLS
EVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVN
KYGFIESPYRRIRDGKQTDEIIYLSAMEEAKYNVAQANAAVDKEGRLTDDLIVCRRAGEV
IVTPVDKVDFQDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRADAPFVGT
GMEAVVARDSGAAIAARRSGVVDQVDATRIVIRASDEMDPTKPGVDIYRLQKFQRSNQST
CITQRPLVRVGDIIKKGDIVADGPSTEFGELALGRNVLVAFMPWNGYNFEDSILLSEKIV
SDDIFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVAAGDIL
VGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDE
RAQAIEREEIERLAKDRDDEQAILDRNTFARLGDILTGKTGLAGPKGFKKDTVITREGMT
EFPRSQWWLFATGDDALMTEIEAMRKQYDESKKRLEQRFLDKVEKLQRGDELPPGVMKMV
KVFVAVKRKIQPGDKMAGRHGNKGVVSRIVAAEDMPFLEDGTHADIVLNPLGVPSRMNVG
QILETHLGWAAAGLGKQIGAALDAYKKSNDYKALRASFEAVYEDNEIIASMDETELVEMG
QNLRRGVPMATPVFNGAKEADIERLLEQAGLHSSGQSTLYDGRTGEPFDRKVTMGYIYML
KLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTV
KSDDVAGRTKVYESIVRGEDNFEAGIPESFNVLVKEMRSLGLNVELINNKPKTGELPPAE
AAE
NT seq 4152 nt   +upstreamnt  +downstreamnt
atggtcaattcgctccagggccgcaggcgcgtccgcaagttcttcggaaagctcaaggaa
gtcgcgcagatgccgaacctcatcgaggttcagaaggcgtcatacgaccagttcctgatg
gtcgaggagcccaagggcggccgcggcgacgaaggcctgcagtccgtcttccgctcggtg
ttcccgatcggcgatttctcgggcgcctcgctgctcgaattcgtcaaatacaccttcgag
ccgccgaaatacgacgtcgacgagtgccgccagcgcggtatgaccttctcggccccgctc
aaggtgacgctgcgcctgatcgtgttcgatatcgatcccgacacccaggcgaagtcggtc
aaggacatcaaggagcaggatgtctacatgggcgacatgccgctcatgaccgacaacggc
accttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgttcgccgggc
gtgttcttcgaccacgacaagggcaagacccactcttcgggcaagctgctcttcgccgcg
cgcatcatcccctatcgcggctcctggctcgacatcgagttcgacgccaaggacatcgtc
tacgcgcgcatcgaccggaagcgtaagattcccgtcacatcgctgctgtttgcgctcggc
atggacggcgaggagatcctcagccgcttctatgcgcacatcacctatgtccgcgacggc
aagggctggcgcgttccctacgatgccgagcgcatgaagggcttcaaggcgaccgtcgac
ctgatcgacgccgataccggcgaggtcgtggtcgaggccggcaagaagctcgttgcccgc
accgcgcgccagcttgctgaaaagggcctcaagttcctgcgcgcgaccgacgaggatctc
gtcggccagtacatcgccgaggacatcgtcgaccccgagaccggcgaagttcatgccgag
gccggcgaagagctgacaatggccgccgaggccaagaccggcgacatcaagggcaatctc
gtcgatctgatcgccaagggctacgacgagatcacggtgctcgacatcgaccacatcacg
gtcggcccctatatccgcaacacgcttaccgtggacaagaactcgcgccgggaagaggcg
ctgttcgacatctatcgcgtgatgcgtcccggcgagccgccgacgcttgagactgccgag
aacatgttccagtcgctgttcttcgactcggagcgctacgacctgtcggccgtcggccgc
gtcaagatgaacatgcgcctcgacctcgacgccgaggacaccgtccggatcctccgcaag
gaggacatcttcgcggtcgtcaaggcgctggtcgatctgcgcgacggcaagggcgagatc
gacgacatcgaccatctcggcaaccgccgcgtgcgttcggtcggcgagctgatggagaac
cagtatcgcctgggcctcctgcgcatggagcgcgccatcaaggagcggatgtcctcggtc
gatatcgacacggtgatgccgcaggacctcatcaacgccaagccggcggccgcagcggtg
cgcgaattcttcggctcgtcgcagctgtcgcagttcatggaccagacgaacccgctctcg
gaagtcactcacaagcgtcgtctttcggcgcttggacccggtggtctgacccgcgagcgc
gccggcttcgaggtgcgcgacgtgcacccgacgcattacggccgcatctgcccgatcgag
acgccggaaggcccgaatatcggactgattaactcgctcgccaccttcgcgcgggtgaac
aagtacggcttcatcgagagcccctatcgccgcatccgcgacggcaagcagaccgacgag
atcatctatctctcggcgatggaggaggcgaagtacaacgtcgcccaggccaacgcagcc
gtggacaaggaaggccgtcttaccgacgacctgatcgtctgccgtcgcgccggtgaggtg
atcgtgacgccggtcgacaaggtcgatttccaggacgtgtcgcccaagcagctcgtctcg
gtcgccgcggcgctgatcccgttcctcgagaacgacgacgccaaccgcgcgctgatgggc
tcgaacatgcagcgccaggcggtgccgctggttcgtgccgacgcgcccttcgtcggcacc
ggcatggaagccgtcgtcgcccgtgactcgggtgcagcgatcgccgcgcgccgctccggc
gtggtcgaccaggtcgatgcgacgcgtatcgtcatccgcgcgtcggacgagatggacccg
accaagcccggcgtcgacatctaccgtctgcagaagttccagcgctcgaaccagtctacc
tgcatcacgcagcgtccgctggtgcgcgtcggcgacatcatcaagaagggtgacatcgtc
gcggacggcccgtcgaccgagttcggcgagcttgctctcggccgcaacgtgctcgtcgcg
ttcatgccgtggaacggctacaacttcgaggactcgatcctgctctcggagaagatcgtc
tctgacgacatctttacctcgatccatatcgaggaattcgaggtcatggcccgcgacacc
aagctcgggccggaggaaatcacgcgcgatattccgaacgtttcggaagaggcgctgaag
aacctcgacgaggccggcatcgtctatatcggcgcggaagtggcggccggcgacattctc
gtcggcaagatcacgcccaagggcgaaagcccgatgacgccggaagagaagctgctgcgc
gccatcttcggcgagaaggcctccgacgtccgcgacacctcgctgcgggttccgcccggc
gtgcagggcacgatcgtggaagtgcgcgtgttcaaccgccatggcgtcgacaaggacgag
cgcgcccaggcgatcgaacgcgaggagatcgagcgtctcgccaaggaccgcgacgacgag
caggcgatcctggaccgcaacaccttcgcgcgtctcggcgacatcctgaccggcaagacc
ggtctcgccggtcccaagggcttcaagaaggacacggtcatcacccgcgagggcatgacc
gagttcccgcgctcgcagtggtggctgttcgccaccggcgacgacgccctgatgaccgaa
atcgaggcgatgcggaagcagtacgacgagtcgaagaagcgcctcgagcagcgcttcctc
gacaaggtcgagaagctgcagcgcggcgacgagctgcctccgggcgtgatgaagatggtc
aaggtcttcgtcgcggtgaagcgcaagatccagccgggcgacaagatggccggccgccac
ggcaacaagggcgtggtctcgcgcatcgtggctgccgaggacatgcccttcctcgaggac
ggcacccatgccgacatcgtgctcaacccgctcggcgtgccctcgcgcatgaatgtcggc
cagattctggagacccatctcggatgggccgccgcaggtctgggcaagcagatcggcgcg
gcgctcgacgcttacaagaagtcgaacgactacaaggcgctgcgtgcctcgttcgaagcc
gtctacgaggacaacgagatcatcgcctcgatggacgagaccgagctcgtcgagatgggc
cagaacctgcgccgcggcgtgccgatggcgacaccggtgttcaacggcgccaaggaggcc
gatatcgagcggctgctggagcaggcgggtctgcactcgtcgggtcagtcgacgctctat
gacggccgcaccggcgagcccttcgaccgcaaggtgacgatgggctacatctacatgctc
aagctgcaccatctggtcgacgacaagatccatgcccgttcgatcggcccgtactcgctc
gtcacccagcagccgctgggcggcaaggcgcagttcggcggacagcgcttcggcgagatg
gaggtctgggcgctggaagcctatggcgccgcctacacgctgcaggagatgctgacggtg
aagtcggacgacgtcgcgggccgcaccaaggtctacgagtcgatcgtgcgcggcgaggac
aacttcgaggcgggcattcccgagagcttcaacgtgctcgtcaaggaaatgcgctcgctc
ggcctcaatgtcgaactgatcaacaacaagcccaagaccggcgagttgccgccggccgaa
gcggccgaataa

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