KEGG   Bipolaris oryzae: COCMIDRAFT_37729
Entry
COCMIDRAFT_37729  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K11099  small nuclear ribonucleoprotein G
Organism
bor  Bipolaris oryzae
Pathway
bor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCMIDRAFT_37729
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bor03019]
    COCMIDRAFT_37729
   03041 Spliceosome [BR:bor03041]
    COCMIDRAFT_37729
   03032 DNA replication proteins [BR:bor03032]
    COCMIDRAFT_37729
Messenger RNA biogenesis [BR:bor03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     COCMIDRAFT_37729
Spliceosome [BR:bor03041]
 Complex A
  U1 snRNP components
   Sm proteins
    COCMIDRAFT_37729
  U2 snRNP components
    COCMIDRAFT_37729
 Complex B
  U1 snRNP components
    COCMIDRAFT_37729
  U4/U6.U5 tri-snRNP components
    COCMIDRAFT_37729
 Complex C
  U2 snRNP components
    COCMIDRAFT_37729
DNA replication proteins [BR:bor03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     COCMIDRAFT_37729
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 19123313
NCBI-ProteinID: XP_007689035
JGI: Cocmi1_37729
UniProt: W6YYM3
Position
Unknown
AA seq 84 aa
MPQAQPELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALEEKAGGEKVRIGMVV
IRGNAVVMLEALDRINQDVPKIGR
NT seq 255 nt   +upstreamnt  +downstreamnt
atgcctcaagcacagcccgagttgaagaagtacttggagaagcgcgtcctcgtacagttg
aacggtagtcgcaaagttatgggtatcctccgtgggtacgacgtctacctaaacattgtc
ctcgacgaagcacttgaggagaaggctggcggtgaaaaggtgcgcattggaatggtggta
attcgcggaaacgccgtagttatgctcgaggcgctcgaccgtatcaaccaggacgtccct
aagatcggacggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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