KEGG   Bipolaris oryzae: COCMIDRAFT_80179
Entry
COCMIDRAFT_80179  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K14311  nuclear pore complex protein Nup188
Organism
bor  Bipolaris oryzae
Pathway
bor03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCMIDRAFT_80179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bor03019]
    COCMIDRAFT_80179
Messenger RNA biogenesis [BR:bor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     COCMIDRAFT_80179
SSDB
Motif
Pfam: Nup188_C Nup188_N-subdom_III Nup188_SH3-like Nup188_N
Other DBs
NCBI-GeneID: 19125619
NCBI-ProteinID: XP_007682474
JGI: Cocmi1_80179
UniProt: W6ZM88
Position
Unknown
AA seq 1877 aa
MAPLQSPDFDLAKCLNGEQQLVTWDVAYRALCDPATASKSDALRAFLSTKENIDTLTHPW
RPFPDPSSQEKSKFESKTAPISVTPAQSDHYDVEEIKEDSLWLAKEAQISEYAALQLVVQ
EWQGRPAAQLLSGLTEEEALSVQDAAGIANLGASTFVPNSSLLATPLASKTAHLDTKNQR
RLHILDIYHSTCASIIRISQLLVSWGCASNLRNQTIYGTEYLSIGAGWIEELGQTIAAAQ
DGPSGGKALDECLKAFSKRCDSLDTGYAWNVDDSILEAASEKWVVAQTTELLHILHLALV
HADLVAKDFLPAATIEDWLKAFSFRGFFREFPAVTARQEPLIPVIQLLTSLMSLTILKVD
KIMDDLESGDCNTWHSSSYILNTNVVETITTIFGEAKVLGASPATPPMFAWALITWKLTS
RASYEEQERERLLESSNGAGNTESEPSSLEEAALVITKLENHELFDGKMPYEDLATVSSA
AGVLAIINQLVETSLPAFGTSIDRISQDRVRLLFLHVVRAAVGSEIVAYSPDLIVTTYTI
LAGDNTFRRWDNGQFARHADPIVAYFLEDEYILRPMLLNEARLRYPYEMTPFLKFCSALT
RGDKTMQNGMPSFVDKLANHNRLMQRLPDGFRDYQLTREEENANWVELTADLPLFSSAGS
STFGAQRRLMASGTSRYTHGFSTIPAGTEGIIVDDNSQPYVAVWHHQHSTLSYLVELLST
YPVGSSKVETATQQRASRESVVEVIGLFADLIHSSLHSSEGICSPELLEAIGIGAEGSVD
TVNIVLAIFEEELLYLCQEPSNEVSLELLVNCTHFLEALVIVSPQRVWPWLARSRLLEGD
GNGSLATILISTEMVLGRYDFLLGCIRLYKGLVKDSVDRSVSRKVPTKALSRFNASAPAD
SGTSDKIMSTILFTFGRTLASIYENSLNWKYSQPDHRPEINTAICEVFTTILSLAYSVDD
APKLSTKLTKSIAPIAEYLTQLYLAGSDSNLPTNPLMTSLIIGVSPNDNTLLTTSGALWT
QQTQSTLAFADLLVRIAMLLNKPWTHLEQQLFKATPLLARLYATSDKWKSQVVLLLEALV
RGAVRVTIQEESETADKKTEQREPPSLLGHLGPRTAKNFLSVLSRLDEPLKIVDIQRNVW
NLLSAVVTCKQQWFSLYLLTGNTPRETIRSKRNVAQDSRNKALLTRAFDALSSMALPEKE
PAGVSWPLFTAMLEFVSSAQNNWSWAMGDLRQRKDLIQKLLTFLKWMAKQSKQPRISSNE
ETLERSFQNKFASLACEVIAMYLHSSRQVGDITVLKDIVPSLTYLEDTALDLPSYSTSLH
GYLKQNLEQQYPGVSLANLKRTTLYPETFGRAFFYDIDLAQQLLGFNSKWAGPREGTGFA
SEVEKANYNLGLVESQVLLLHGWKLLALELSQMVAKDERIVKVLIGVVQKCMSANTQSNL
PEALFGQLMVVRADLAFALLKKLVEAKVRTAEARQLLSPIWSAIRASTPDFDSVFSSDSV
HYYRSLLRILYLALHFHLIEDTDQSSDASFRSSFRGTMPSSHNNYTEPISTQLLEILTDT
VAKGFRSLATQLHAEPLSVLPSDFALLTALLQRIIAIPEMSKWQQQAALLFANNNTVRYA
TSLFSWADRLAISHNGVEDPIYGELSILFLLSLSSIQALAETMAVEGILSQLNTANIMNY
YRRVNGTGPFDSPVRMYSVWTKGILPLCLNLLLSVGPPIAGEISSFLNQFPEQLARSASS
INSSNSSSRLAANSNRITLSVASEIHSLALIAAILENVRKQGPKLGIQANEVALLEWEKD
VVKEDVESWLSRKSALRERLVAVDEKELDMLNRTKGKGEDAPSELEERVVAELEDARTCM
VGGANGGGSGNGDSTRK
NT seq 5634 nt   +upstreamnt  +downstreamnt
atggccccccttcaatcgcccgacttcgacctggcaaagtgcctcaacggcgagcagcag
ctggtcacctgggacgtcgcataccgcgccctctgtgaccctgcaaccgcgtccaaaagc
gacgccctacgcgcattcctctccaccaaggaaaacatcgacaccctcacccatccatgg
cggcccttcccagacccgtcgtcacaggaaaagtcaaagtttgaatccaagacagcgcct
atcagcgttactcctgcccaaagcgaccactatgatgtagaggagattaaagaagacagc
ttgtggctggccaaggaagcgcaaatctcggaatacgcagccttgcaacttgttgtgcag
gaatggcagggtcgccctgccgcccagctgctgagtggcctaacggaagaggaggcgctc
agtgtgcaagacgcggccggaatcgccaacctaggcgcctcgacctttgtcccaaactcg
tccctcctcgcaacaccgctcgcctccaagactgcccacctcgatacaaagaaccagcgc
cgtctgcacatcctcgacatctaccactcgacttgtgcctccatcattcgcataagccag
cttctggtctcgtggggctgcgcatccaatctgcgcaatcagaccatatatggcactgaa
tacctcagcattggcgccggatggattgaagagctcggccagactatcgcggcagcacag
gacggaccctcgggtggaaaggcgctagacgaatgcctcaaggctttttcaaagagatgt
gattccttggataccggctatgcgtggaatgtggacgattcaatacttgaagcagcgtcc
gagaagtgggtcgtcgcccaaaccaccgagctgctacacattctccacttggcactagta
catgccgatttggttgccaaagatttccttccagcggccacgatcgaagactggctcaag
gcctttagtttccgtggcttctttcgcgaattccccgcagtcactgcccgtcaagaacct
cttatcccggtcattcaactcttgacttcactcatgtccctgacaatcttgaaggtcgac
aagattatggacgatctcgaatctggcgattgcaatacgtggcattcttcgtcgtacatc
ttaaacaccaatgttgtagagaccatcacaaccatattcggggaggctaaggtattgggt
gccagtcctgccacgccacccatgtttgcctgggccctcataacgtggaaacttacgagc
cgtgcgagctacgaggagcaagaacgcgaacgtctcctggaatcatcaaatggcgccgga
aacaccgaatctgagccttcatcccttgaggaggctgctttggtaattacaaaactcgag
aaccacgagttattcgacggcaagatgccatacgaagaccttgctaccgtcagctcagca
gcaggtgtcctagccatcatcaaccagcttgtcgaaaccagtctccctgcgtttggcacg
tccattgaccggatatctcaggacagagttcgattgctgttccttcacgtagttcgcgct
gctgttggcagcgagattgtcgcctacagtccagatctcattgtgacaacatacactatc
ctggccggtgacaacacatttcgccgatgggacaatggccaatttgcccgccacgctgat
ccgattgtggcatatttccttgaggacgaatacatccttaggccaatgttgctcaatgaa
gcccgtttgcgatatccctatgagatgacaccatttctgaaattctgcagcgcattgact
cgtggagacaagacgatgcagaacggcatgccttcctttgttgacaagcttgccaaccac
aaccgcttgatgcaacgccttccagatggattccgtgactatcagctaacgcgtgaagag
gagaatgccaactgggtagaacttaccgctgatctccccttgttttcttctgcaggctca
tccacctttggtgcccaacgtcgtctgatggcctcgggtacttcaagatacacacacggc
ttctccactattccggccggcacagagggcatcatagttgacgacaactcacagccatat
gtggcagtctggcatcaccagcattctactttatcatacctcgttgaacttctctctaca
tatcccgttggaagcagcaaagtcgagactgcaacccagcaacgcgcgtctcgtgaaagt
gttgtagaagtcattggccttttcgctgacctgatacactcgtccttgcactcgtctgag
ggcatctgctcacctgagctcctagaagcaattggcattggagctgaaggcagtgtggac
actgttaacattgtgctcgcgattttcgaagaagagcttttatacctctgtcaggaaccc
agcaacgaggtatctttggagctattggtcaactgcactcatttcttggaagctttggtc
attgtttcccctcaaagagtatggccgtggctcgctaggagtaggttattggagggtgat
ggcaacggaagcttggcaaccatcctaatcagcactgagatggttcttggacgatacgac
ttccttcttggatgtattcgactctacaagggtcttgtcaaagattctgtcgatcgatcc
gtgtcccgtaaagttcccacaaaggcactcagtcggttcaatgcatcggcccccgccgac
agcggtacttcggacaagattatgagtaccattctgttcacttttggtcgtactcttgcc
agcatatatgagaactcgctcaactggaagtactcgcagccggaccatcgccccgagatc
aacactgccatttgcgaagtatttaccacaatattgagtcttgcatacagcgtagatgat
gcgccaaagctgtctaccaagctcacaaaatcgattgcacccatcgctgaatatctcact
caactctatcttgctggctcagatagcaacctgcctacaaacccgctcatgacatctttg
atcatcggggtcagccccaatgacaacaccttgctcacgacttcaggtgcactgtggact
caacagacccaaagcaccttggcgtttgccgacctactggtccgaattgccatgctgctt
aacaagccctggactcatctggagcagcaactcttcaaagcaacaccgttactagcccga
ctgtacgcgacaagtgacaagtggaagtcccaggttgtgctgttgttggaagctctggtc
cgtggcgcagtccgtgttaccatccaagaagagtcagaaacagccgacaagaagactgag
cagcgagaaccgccttcgctactaggccatctgggaccacgaactgcgaagaacttcctc
agtgtgctttctcgactagatgagccactaaagatcgtggacatccaacggaacgtgtgg
aacttactttcagctgtagtaacgtgcaagcagcagtggttctctctgtatctgcttacc
ggaaacacgccacgagaaacgattcgaagcaaaagaaacgtggcccaagattcaaggaac
aaagccctgctcacacgagcttttgatgcgttgtctagtatggctctcccagaaaaagaa
cctgctggcgtttcatggccgctatttacagccatgctcgagttcgtctcttcggcgcaa
aacaactggtcatgggcaatgggcgacttgcggcagcgcaaggatttgatccagaaattg
ctcacattcctcaaatggatggcaaagcagtctaaacaaccgcgaatcagcagcaatgaa
gagacactggaacgatcgtttcaaaacaagttcgcatctctcgcctgcgaggtcattgcc
atgtaccttcacagctcgcggcaggtcggtgacattaccgtactgaaagacattgttccc
agcttgacgtacttggaagatactgctttggatctgccatcttacagtacgtcactgcac
ggatacttgaagcagaacctggagcaacagtaccctggtgtctctctagcgaacctcaag
cggaccactttgtaccctgagacgtttggacgggcattcttctatgacattgatctcgct
cagcaactcctgggtttcaacagcaagtgggctggccctagggagggcacgggtttcgca
tctgaagtcgaaaaggcaaactacaatctaggactggtagaatcccaagttttgttactt
cacggttggaaactgttggctctggagcttagccagatggtagcaaaggacgagcgaatc
gtcaaggtcctcattggtgttgttcaaaagtgcatgagcgccaatacacagtcgaacctt
ccggaagcattgtttggtcagctcatggtcgtgcgagcggatctggcatttgctttactg
aagaagcttgtagaggccaaggtccgaactgcagaagcgcgtcaattgcttagcccaata
tggagcgccattcgcgcctcaactccggacttcgatagtgtcttctccagcgactcggtc
cactactaccggtccttgctacgcatcctctacctcgctcttcacttccatctgattgag
gataccgaccagtccagcgatgcctcgttccgctcaagcttccgtggcactatgccgagc
agtcacaacaactacactgagcccatctccacacagctcctcgaaattctgaccgataca
gtagccaaggggttccgtagcttggccacacagctgcacgcggaacccttgtccgtctta
ccatcagactttgctctcctcaccgcgctgctacagcgcatcattgcgataccagaaatg
tccaagtggcaacaacaagcagcgcttctctttgcaaacaacaacacagtgcgctacgcc
accagtcttttctcctgggccgatcgcctcgccatatcacacaacggcgtggaggatcct
atctacggcgagctaagcatcctcttcttgctctcactatccagcattcaagctctagcc
gagaccatggccgttgaaggtatccttagccaactcaacacggcaaacattatgaactac
taccgtcgcgtaaacggcactggtccctttgacagcccggttcgcatgtactctgtctgg
accaaggggatccttcccctctgcctcaacctcctcttatccgtcggaccccccattgct
ggcgagatttcctcattcctcaaccagtttcctgaacagttggcccgctcagcatcgagc
atcaactcatccaattcatcgtctcgtctcgcagccaacagcaacaggatcacgctttct
gtggcatctgagatacacagtctggcccttatcgccgcgatcctagaaaacgtgcgcaaa
caagggcctaagttaggtattcaggccaacgaagtggcgcttctagaatgggaaaaggat
gttgtcaaagaagatgtggagagttggttatcacgcaaaagcgcgcttagggaacgtctt
gttgcggttgatgagaaggagttggatatgctgaatcgcaccaagggcaagggagaagat
gcgcccagtgagttggaagagagagttgtagctgagctcgaggatgcgaggacatgtatg
gttgggggtgcgaacggtggtgggagtggtaatggagacagtacgaggaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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